Coregonus clupeaformis (lake whitefish): 121554983
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Entry
121554983 CDS
T08357
Symbol
ints6
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121554983 (ints6)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121554983 (ints6)
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GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
VWA
VWA_4
Motif
Other DBs
NCBI-GeneID:
121554983
NCBI-ProteinID:
XP_041724659
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Position
40:10095524..10134954
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AA seq
873 aa
AA seq
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MPVLLFLIDTSASMNQRTHLGTTYLDIAKGAVETFMKLRGRDPASRGDRYMLINFEDVPL
GIKAGWKESHATFMTELRNLQAAGLTTIGQSLRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSIIVAITDGNKLTSSGGVQDELHLPLTTPLPGSELTKEPFRWDQRLFSLVLRIPGHAT
VEPEPLGGVPPDDSAITPMCEVTGGRSYSVFSQRMLNQCLESLLQKIQSGVVINFEKTGP
DPPPGEDEILKPGLQSWHCCHKLIYVRPNPKTGVPIGHWPIPEAFWPDTNSPTLPPRSAH
PHVRFSCLDAEPMVIDKVPFDKYELEPSPLTQYILERKSPHTCWQVYVSNSAKYSDLGQP
FGYLKASTALNCVNLFVMPYNYPVVLPLLDDLIRVHKFKPTIKWRQSFENYLKTMPPYYI
GSLRKALRIMGAPNLLADNMEYGLSYSVVSYLKKLSQQTKIEYERLIASVAKKVVAEGGI
KVRARGGDISLAQRRDFTQLLASITGETPALPLELNPKEFSGFQLAPLNKSLKPQGFRNA
YDIPRMHLLDQLSRMRRNLLSTSCLLRGQDTDQLHSVPIAQMGNYQDFLKALPQPLRDAD
PEQPKRLHTFGNPFKLDKKGMMIDEADEFVTGPQNKGKRPGSDTNMHGVGGGGPKRRRCM
SPLLRPGRTYTPPVSPAASPSRSPLTESDHTESDSEAVFGNLYSPEGCETGTAAQPGPGE
ILSGPLLDGPGPGNHMEDDGDGDTEEENGLPREVELSEGSEDGGETGGVEEERLPRYPSP
GELKKVMNSESLEVNTELRALITKEIRKPGRHYEKIFHFLKQIQGSFDTRLIFLQNIIKE
AARFKKRVLIEQLENFLEEIHNRANNMNHLDGF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgttactttttctgatagacacgtccgcgtcaatgaaccagcgcacccatctg
ggcactacctatctggacattgcaaaaggcgctgttgagactttcatgaagcttagaggc
agagatccggcgagccgaggggaccggtatatgttgataaattttgaggacgttcccctc
ggaatcaaggctggatggaaagagagccatgccacattcatgacggagttgaggaacctt
caagcagcaggactcacaactattggccagtctttgaggaccgcttttgatttgctcaat
ctcaatagattagtgtctgggatagacaactatggacagggcaggaatccctttttcctg
gagccgtccatcatagtggccatcaccgacggcaacaagctgaccagcagtggcggagtc
caggatgagctccaccttcccctgaccactcctctgccgggcagtgagctgaccaaggag
ccgttccgctgggaccagcgtctgttctccctggtgctgaggatccctgggcacgccact
gtagagcctgaaccactggggggggtcccccccgacgactcggccatcacccccatgtgt
gaggtcaccggaggtcgctcctacagtgtgttctcccagcgcatgttgaaccagtgtctg
gagtctctactgcagaagatccagagtggagtggtcatcaactttgagaagacaggccct
gacccccctcctggagaggatgagatcctgaagcccggcctccagtcctggcactgctgc
cacaagctgatctacgtacgacccaaccccaagactggtgtgcccatcggacactggccc
attcctgaagccttctggcccgacactaactcccccacactgcccccccgctcagcccac
ccccacgtgcgtttctcctgcctggatgcagagcccatggtgatagacaaggttcccttt
gacaagtacgagctggagccttcacccctcacacaatacatcctggagaggaagtcccct
cacacctgctggcaggtgtatgtaagtaacagtgccaagtacagtgatctgggccagccc
tttggctacctgaaggccagcacggctctcaactgtgtcaacctgttcgtcatgccctac
aactaccctgttgtactgcctctactggatgacttgatccgggtgcacaagttcaagccc
accattaaatggcgtcagtcctttgagaactacctgaagaccatgcctccgtattacatt
gggtccctccggaaggcgctaaggatcatgggagctcccaacctcctggctgacaacatg
gagtatggtctgagttacagtgtagtgtcctacctcaagaagctcagccagcagaccaag
atcgaatacgagcggctgatagcgtctgtagctaagaaggtggtagcggagggtggcatc
aaggtgcgtgcccgaggtggggacatctccctggcccagcgcagagacttcactcagctt
ctggccagcatcacaggagagacgcccgcccttcccctggagctcaaccctaaagagttc
tctggctttcagctggcgccgctcaacaagagtctgaaacctcagggtttcaggaacgcc
tacgacatacccagaatgcatctgctggatcagctgagccgcatgaggaggaacctgctc
agcaccagctgtctgctccgaggacaggacacagaccagctccacagcgtgcccatcgcc
cagatgggcaactaccaggacttcctcaaggcccttccccaacccctcagagacgcagac
cctgagcaacccaaacgcctgcacaccttcggaaaccccttcaaactggacaagaagggg
atgatgattgacgaggcggatgagtttgtgacgggtccccagaacaagggcaagcgcccg
gggagtgacaccaacatgcacggggtcggaggcgggggccctaagagacggaggtgcatg
tcccccctactgcgccccggcaggacctatacaccccctgtcagccctgcagccagcccc
tccagatcccccctcactgagagcgaccacactgagtcagactcagaggctgtgtttggg
aacctctacagccctgaggggtgcgagaccgggacagcagcccaaccaggaccaggagag
atcctctctggaccccttctagacggccccggaccagggaaccacatggaggatgatggt
gatggggacactgaggaggagaacgggcttcccagagaggtggagctctccgagggcagt
gaggacggaggagagactgggggtgtggaggaggagcgtctgccccggtacccctccccc
ggggaactgaagaaggtgatgaacagcgagagtctggaggtcaacaccgaactacgagcc
ctcatcaccaaggagatacggaaaccagggagacactatgaaaaaatcttccatttcctg
aagcagatccaaggaagctttgacacacggttgatattcctccagaacattataaaagag
gctgcaaggtttaagaagcgggtgctgatagaacagctggagaactttctagaagagatc
cacaacagggccaacaatatgaaccacctggacgggttctaa
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