Coregonus clupeaformis (lake whitefish): 121555008
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Entry
121555008 CDS
T08357
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121555008
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
121555008
NCBI-ProteinID:
XP_041724699
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Position
40:10312605..10346210
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AA seq
623 aa
AA seq
DB search
MDSPMCLVENVDSVLRVVPMAIDYLMGVKQQVVVVAVVGLYRTGKSYLMNKLAQKKTGFA
LGATIQSKTKGIWMWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLNILLSSTL
VYNSQGTINNDAVEKLQYVNELTEMIKVKSPTGNEEEEGTQFVQFFPDFVWTVRDFTLQL
EIDGREITPDQYLENSLQLRKGTSKKINDYNLPRECIRKFFPKRKCFVFPSPTTPDNMQR
LESMDEAELSESFREVADTFCRFIFKESRVKTVIGGHTLTGEMLGHLVNTYVETIAKGNV
PCLENAVLAMAKIENQAAMDEGLAVYQKGMEDVKDLFPVDINQLTEKHLSSETQAMQAFM
KRSFKDENGEFLKALAEAISNHSADLFKQNKDASEKKCKALLEKLSAPMDQGMKDGMYAT
PGGYELYCNHHDNIVAQYRAEPNKGVRAEEVLEQFLKEKSSESNSILQADNKLSENEKTI
QAEKKKTAELEQEKAAFKQQKAEMECTIENIGKGQEKYLKEMKEKMEEERKQQKQEFNRT
LERRMQEQKDLMEKGHKEKADLMRQEIEEIKKKNQLEKDHSNQNQMALLESLKQQAEEQK
KQMEALMQERSPVKVVERLCIVL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaatgtgcctggtcgaaaacgtcgacagcgtgcttcgtgtagtcccaatg
gccatcgactacctgatgggagtgaaacagcaagtcgtagtggtggcggtggtcgggctg
tatcgcaccggcaagtcttacctcatgaacaagctggctcagaagaaaacaggttttgcc
cttggagccaccatccagtccaagactaagggcatctggatgtggtgtgtccctcatcct
gaaaaaacagaccacaccctggtgctgctggatacagaggggctgggggacgtggagaag
ggggattctaagaatgatgcctggatcttctccctgaacattctgttaagcagtactctg
gtctacaacagtcaagggaccatcaacaatgatgctgtggagaagcttcaatatgtgaac
gagctgacagagatgatcaaggtgaagtctcccactggcaatgaggaggaagagggcacc
cagtttgtgcagttctttcctgattttgtgtggaccgtcagagatttcactctacagctt
gagatcgacggcagagaaatcactccagaccaatatctggagaattccctgcaactcagg
aaaggaactagtaaaaagataaatgactacaacctcccacgagagtgcatccggaagttc
ttccccaaacgcaagtgttttgtgttcccctcccctacaactcctgacaacatgcagcga
ctggagtccatggacgaggctgagctttctgaaagcttccgagaggtcgcagatactttc
tgccgcttcattttcaaggagagccgtgtgaagactgttatagggggacacacattgacc
ggagagatgctaggccacttggtaaacacctatgtggagaccatagccaaaggcaacgtg
ccctgtctggagaatgcggtgctggccatggctaaaattgagaaccaggctgctatggat
gagggcctggcggtgtaccagaaaggcatggaggatgtgaaggacttattccctgtggac
atcaatcagctgacagagaagcacctcagttcagagacccaggcaatgcaggcgttcatg
aagagatccttcaaagacgaaaatggggaattcttgaaagctctggcggaggccattagc
aaccactccgccgaccttttcaaacagaacaaggatgcctcagagaagaagtgcaaggcc
cttctggagaagctgtctgctccgatggatcaggggatgaaggatgggatgtacgccaca
ccgggaggctatgagctttactgcaatcaccatgacaacatagtggcacagtaccgggcc
gagcccaacaaaggagtcagggctgaggaggttctggagcagttcctgaaggaaaagagt
tcagagtccaactccatcctgcaagctgacaacaaactgagtgaaaatgagaaaacaatc
caagctgagaagaagaaaacagctgagctggagcaggagaaggcagcattcaagcagcaa
aaggcagagatggagtgcaccattgagaacattggcaagggccaggagaagtatttgaag
gagatgaaagagaagatggaggaggagaggaagcaacagaagcaggagttcaacaggacc
ctggaacgcaggatgcaggagcagaaagatctcatggagaagggccataaggagaaggct
gacctaatgagacaagagatcgaggagataaagaagaagaatcaattggaaaaggaccac
agtaaccagaatcagatggctctgctggaaagcttaaagcagcaggctgaagaacagaaa
aagcagatggaagcgttaatgcaggaaagatctcctgtaaaagttgttgaacgactctgt
atcgtactgtga
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