Coregonus clupeaformis (lake whitefish): 121555035
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Entry
121555035 CDS
T08357
Name
(RefSeq) oxysterol-binding protein-related protein 6-like
KO
K20463
oxysterol-binding protein-related protein 3/6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121555035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121555035
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
121555035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oxysterol_BP
PH_8
PH
Motif
Other DBs
NCBI-GeneID:
121555035
NCBI-ProteinID:
XP_045068015
LinkDB
All DBs
Position
40
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AA seq
892 aa
AA seq
DB search
MSQHHHRNPSQGSHRTMSAEERCTTPVRHHKTPTHKSSSSSSSSQRNSRQEADSWEIIEG
LKIGQSNVQRPDKYEGFMLKKRKWPLKGWHKRFFVLDNGMLKYSKSPIDIQKGKLHGCID
VGLSVMSIKKKARRIDLDTEEHIYHLKIKSPDIFDSWVVKLRHHRLYRQNEIVRSPRDAP
IRTFPPPASTDASSLSVGSSSLSVSASSLSVSSLPWRLAPLPCRSSLPASYSDGQSKVAA
WLQESEEMDKCTEELARCQSSLIELSRLLQSLEILQRTQSAPNFTDMQVPSLPVSASMSP
THLRSSNPNLCAELVDFQTPVSRLVPDNMECGGDYIKLQEDFCLLAQKVHSLLKSAFNTV
AMEKEKIKTVLSDQEQSAQIITLRKSLSQALSQNAELKTRLGRIHSESVPSEQTVSVNII
PSPDEGGEQRGIPLTQQTSNESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYVSDV
SDNISEDNASVTDNVSRQMPNGDLAGRAFRNGRRPCLPAPSPDCSNINLWNILRNNIGKD
LSKVSMPVELNEPLNTLQHMCEELEYAELLDRAADTEDPYERMAIMAAFVISGYSSTYYR
AGSKPFNPLLGETYESVREDKGMCFIAEQVSHHPPISACHADSNKFTFLQDVRWKNKFWG
KSMEILPIGTVNVMLPGFGDHYEWNKVTTCVHNILSGRRWIEHYGEITIRNTKSSACICK
LTFVKGNYWSSNVNEVQGFVMDQEGKVVRRLFGKWHEGLYYGVPPSARCIWRPGSMPTDY
ELYYGFTRFAIELNELCPEMQDLLPPTDARFRPDQRHLEEGNVEMAASEKQRIEDLQRTR
RKWQEENGIKHEPRFFKKVVDANQRERWVTNNTYWELRKSPGFINMENPNLW
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacaccaccacaggaaccccagccagggcagccaccgcacaatgagcgccgag
gagaggtgtaccacgcccgtccgccaccacaagacgcctacacacaagagctcctcctcc
tcatcctcatcccagcgcaacagccggcaggaggcagacagctgggaaatcattgagggg
ctgaaaatcggtcagagcaacgtccagaggccagataaatacgagggcttcatgctgaag
aagcggaaatggccgctgaaaggctggcacaagcgtttttttgtcctggacaatgggatg
ctgaagtactccaagtcacccattgatattcagaaaggcaagctgcatggttgcattgat
gtgggtctctctgtcatgtccattaagaagaaggcccgccgcattgacttggacacagag
gagcatatctaccacctcaagatcaagtctccggacatctttgactcctgggtggtcaag
ctgcgccaccaccgtctctaccggcagaatgagatcgtccgctcccccagagacgccccc
ataaggacgtttcctccccctgccagcacagacgcctcttccctgtcggttggctcctct
tccctgtcggttagcgcctcttccctgtcggttagctcccttccctggcggttagctcct
cttccctgtcggagcagcctgcctgcctcctacagtgacggacagagcaaggtggccgca
tggctccaggagtcggaggagatggacaagtgtacagaggagctcgcccgctgccagtcc
agcctgattgagctgagcaggttactgcagagcctggagatcctacagaggacccagtca
gcgcccaatttcactgacatgcaggtcccctctctccctgtgagtgccagcatgtctccc
acgcacctccgctcctccaaccccaacctgtgcgctgagctggtggacttccagacccct
gtctctcgcctggttcctgacaacatggagtgtggcggtgactacatcaaactacaggag
gacttctgcctcctcgctcagaaagtccactctctgttgaagtctgcgttcaacacggtt
gccatggagaaggagaagatcaaaacagttctgtcagaccaggagcagtctgcccagatc
atcaccctcaggaagtctctgtcacaggccctgtcccaaaacgctgagcttaaaaccaga
ctgggccgcatccactctgagtcggtcccgtctgaacaaacagtcagtgtgaacatcatc
cccagtcctgatgagggtggggagcagaggggaatccctctgactcaacagacgtccaat
gagagcaggctgtctatgtcagagtctgtgtctgagttcttcgacgcccaggaagtgctg
ctgtctgccagctcgtcagagaacgaggcctcagacgatgagtcatacgtcagcgatgtg
agcgataacatttcagaagacaatgccagcgtgactgataacgtctccagacaaatgccg
aacggagacctggctggacgtgccttccgtaacgggcggcgcccgtgtctccccgccccc
tcgccggactgcagcaacatcaacttgtggaacattctgaggaacaacatagggaaggac
ctgtccaaggtgtccatgcccgtggagctcaacgagcccctcaacaccctgcagcacatg
tgtgaggagctggagtacgctgagctactagacagggctgccgatacggaggacccctac
gaacgcatggccattatggcagcgttcgtcatctcaggatactcctccacgtactacaga
gcgggaagcaagccattcaaccctttactgggagagacatatgaaagtgtccgtgaggac
aagggcatgtgtttcatcgctgagcaggtgagccaccatccacccatatcagcttgtcac
gctgattccaacaagttcaccttcttgcaagatgtcagatggaaaaacaaattctggggg
aagtccatggaaatcctcccgattggcaccgtcaatgttatgcttccaggcttcggtgac
cactatgaatggaacaaagtcaccacctgcgtgcacaacatcctaagcgggagaaggtgg
atcgaacactacggagagatcaccattaggaacaccaaaagcagtgcatgtatctgcaaa
ctcaccttcgtcaagggaaattactggagttctaatgtgaatgaggttcaagggtttgtg
atggaccaagaggggaaggtagtgcgtcggctgttcggcaaatggcacgagggcctttac
tatggagtcccgccctctgccagatgcatctggaggccaggctccatgcccacagactac
gagctgtattatggctttaccaggtttgccattgagctcaatgagctttgccctgagatg
caagacctgctaccgcccacagatgcccgcttcagacccgatcaaagacacctggaggaa
gggaacgtggaaatggcggcctcagagaagcagcgtatcgaggacctgcagcgcaccagg
aggaagtggcaagaggagaacggcatcaagcacgagccacgcttcttcaagaaagtggtt
gatgccaatcaaagggagcgctgggtaactaacaacacctactgggagcttcgcaaatcc
cccggcttcatcaacatggaaaaccctaacctatggtag
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