Coregonus clupeaformis (lake whitefish): 121555040
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Entry
121555040 CDS
T08357
Name
(RefSeq) guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121555040
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Pesticin_RB
Motif
Other DBs
NCBI-GeneID:
121555040
NCBI-ProteinID:
XP_045068011
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Position
40:10417220..10436697
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AA seq
622 aa
AA seq
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MDSPMCLIKNTDGELCVEPEAINYLMGLKQQVVVVAVVGLYRTGKSYLMNKLAQKRTGFA
LGATIQSKTKGIWMWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSTTL
VYNSLGTINNDAVEKLQYVNELTERIKVRSHTDNEEEEEGTQFVQFFPDFVWTVRDFTLQ
LEIEGREITPDQYLENSLQLKKGTSKKINDYNLPRECIRNFFPARKCFVFPSPTTPDNMQ
RLESMDEAELSESFRGVADTFCRFIFEESRVKTVIGGHTLTGEMLGHLVNAYVETIAKGN
VPCLENAVLAMAKIENQAAMDEGLAVYQKGMEDVKDLFPVDINQLSEKHLSSETQATQAF
MKRSFKDENGEFLKALAEAISNHSADLFKQNKNASEKKCKALLEKLSAPMDQEMKEGRYA
TPGGYELYCNHHDNIVAQYRAEPNKGVRAEEVLEQFLKEKSSESNSILQADNKLSENEKT
IQAEKKKTAELEQEKAAFKQQKAEMECTIENIGKGQEKYLKEMREKMEEERKQQQQEFNR
TLERRMQEQKDLMEKGHKEKADLMRQEIEEIKKKNQLEKDHSTQNQMALLESLKQQAEKQ
KKQIKALMQERSQADERLCIVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaatgtgcctcattaaaaacaccgatggagagctttgtgtagaaccagag
gccatcaactacctgatgggactgaaacagcaagtcgtagtggtggcggtggtcgggctg
tatcgcaccggcaagtcctacctcatgaacaagctggctcagaagagaacaggttttgcc
cttggagccaccatccagtccaagactaagggcatctggatgtggtgtgtccctcatcct
gaaaaaacagaccacaccctggtgctgctggatacagaggggctgggggacgtggagaag
ggggattctaagaatgatgcctggatcttctccctggccattctgttaagcactactctg
gtctacaacagtctagggaccatcaacaatgatgctgtggagaagcttcaatatgtgaac
gagctgacagagagaatcaaggtgaggtctcacactgacaatgaggaagaagaagagggc
acccagtttgtgcagttctttcctgattttgtgtggaccgtcagagatttcactctacag
cttgagatagagggcagagaaatcactccagaccagtatctggagaattccctgcaactc
aaaaaaggaactagtaaaaagatcaatgactacaacctcccacgagagtgcatcaggaac
ttcttccccgcacgcaagtgttttgtgttcccctcccctacaactcctgacaacatgcag
cgactggagtccatggatgaggctgagctttctgaaagcttccgaggggtcgcagatact
ttctgccgcttcattttcgaggagagccgtgtgaagactgttatagggggacacacattg
accggagagatgctaggccacttggtaaacgcctatgtggagaccatagccaaaggcaat
gtgccctgtctggagaatgcggtgctggccatggctaaaattgagaaccaggctgctatg
gatgagggcctggcggtgtaccagaagggcatggaggatgtgaaggacttattccctgtg
gacatcaatcagctgtcagagaagcacctcagttcagagacccaggccacgcaggcgttc
atgaagcgatccttcaaagacgaaaatggggaattcttgaaagctctggcggaggccatt
agcaaccactccgccgaccttttcaaacagaacaagaatgcctcagagaagaagtgcaag
gcccttctggagaagctgtctgctccgatggatcaggagatgaaggaggggaggtacgcc
acaccgggaggctatgagctttactgcaatcaccatgacaacatagtggcacagtaccgg
gccgagcccaacaaaggagtcagggctgaggaggttctggagcagttcctgaaggaaaag
agttcagagtccaactccatcctgcaagctgacaacaaactgagtgaaaatgagaaaaca
atccaagctgagaagaagaaaacagctgagctggagcaggagaaggcagcattcaagcag
caaaaggcagagatggagtgcaccattgagaacattggcaagggccaggagaagtatttg
aaggagatgagagagaagatggaggaggagaggaagcaacagcagcaggagttcaacagg
accctggaacgcaggatgcaggagcagaaagatctcatggagaagggccataaggagaag
gctgacctaatgagacaagagatcgaggagataaagaagaagaatcaattggaaaaggac
cacagtacccagaatcagatggctctgctggaaagcttaaagcagcaggctgaaaaacag
aaaaagcagataaaagcgttaatgcaggaaagatcacaggctgatgaacgactctgtatc
gtactgtga
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