Coregonus clupeaformis (lake whitefish): 121555069
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Entry
121555069 CDS
T08357
Name
(RefSeq) unconventional myosin-Ib
KO
K10356
myosin I
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121555069
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121555069
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121555069
03036 Chromosome and associated proteins [BR:
cclu03036
]
121555069
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121555069
04147 Exosome [BR:
cclu04147
]
121555069
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121555069
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Others
121555069
Others
Actin-binding proteins
Myosins
121555069
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121555069
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121555069
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121555069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
TPR_Nup160_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
121555069
NCBI-ProteinID:
XP_041724781
LinkDB
All DBs
Position
40:15601353..15720736
Genome browser
AA seq
1166 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLNEDSFIENLRKRFDHNEIYTYIGSVVISMNPYRSLPI
FTPEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVCKQPRGERNFHIFYQLLSGASDDTLTKLKLDRDFSKYNYLSLDSATVN
GLDDAASFRTVRNAMQIVGFMEDEVQSVLELVAAVLKLGNIEFKPESRVNGFDESRVKDK
NDLKEMCELLGIEQSVLERAFSYRTVEAKMEKVSTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAQAKTRHKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLREE
QEEYVREGIEWTNIEYFNNAVICDLIENNQNGILAMLDEECLRPGTVTDDTFLDKLNTIC
AEHQHFESRLSKNSKFLTDHSLPHSCFRIQHYAGKVLYRVEGFVDKNNDLLYRDLSQAMY
KATHSLMRQLFPEGNPAKVNLKRPPTAGFQFKASVGGLMRNLQTKNPNYIRCIKPNDKKA
AHIFTDSLVCHQVRYLGLMENVRVRRAGYAFRQPYEPCLERYKMLCKQTWPHWRGPARDG
VEVLLTDCSVSAEEFAYGRSKIFIRNPRTLFTLEERRRACLEDLATLIQKIYRGWKCRTH
FLLLKKSQVVVAAWYRRYAQQKKYEKIKSATLVMQSFTRGWKARKILRQLKYEKRCKEAV
TTIAAYWHGTQARMELRRLKTEARNKRAVSVIWAYWQGTKARQELRRLKKEAREKLAVSV
IWAGWQGTKARRELRRLKEEARRKHAVAVIWAYWRGLQVRQEYRKFFRANAGKKIYNFII
QRIMQKYFLGLKTTMPSMSPIDNTWLAQPYSFLEGAHTELRRIFHLWRCKKYRGQFTKEK
KAVYEEKLEASEIFKDKKALYPSSVSQPFKGDYLEIQKNPKYQKLNSAVEEKVLLADVVN
KINRANGKGSPRLFLLTKSNFVLADQKTGQVKASVPLPDLTSVSVSTQSDGFFALKLKEG
SASAAKGDFLLSSEHLIEIITKLHRTGTTAADGDQININISDEFLVQFKQDKVCVKFIQG
GPKNGTSAACKRKNNRLLEVSVPSSP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacatcacttctagacaacatgataggggtgggggacatggtcctgcta
gaacccctcaacgaagactccttcatcgagaacctgaggaaacgcttcgaccacaatgag
atctacacatacatcggcagtgtggtgatctccatgaacccctacaggtctctgccgatc
ttcacaccagagaaggtggaggagtatcgcaacaggaacttctacgagctcagcccacac
atctatgccctggcagacgaggcctaccgttctctgagggaccaggacaaagaccagtgt
atcctcatcacaggagagagtggagctggaaagacagaggccagtaagctagtgatgtca
tatgtggctgcggtgtgtgggaagggccaggaggtgaacaaggtgaaggagcagctgctg
cagtcaaatcccgtgctggaggctttcgggaatgctaaaaccgtgagaaatgacaactca
tcccgatttggcaaatacatggacattgagtttgacttcaaaggagaccctctgggcgga
gttattagcaactatttgctggagaagtccagggtttgcaagcagccgagaggagagaga
aacttccacatcttctaccagcttctttctggagcttcagatgacaccctgacaaagctg
aagttggacagagacttcagtaagtacaactacttgagtctggattcagccactgtcaac
ggactagacgacgcagcaagctttcggaccgttaggaatgctatgcagattgtgggcttc
atggaggatgaggtgcagtcggtcctggagctggtagcagccgtcctcaaactggggaac
attgagttcaaaccagagtccagggtcaacggcttcgacgaaagcagggtcaaggacaag
aatgacctgaaggagatgtgtgagctgttggggattgagcagtctgtgctggagagggct
ttcagctaccgcactgtggaagccaagatggagaaggtgtctaccacactcaatgtggcc
caggcctactatgcccgtgatgccctggccaaaaacctctacagccgtctgttcagctgg
ctggtcacaaggatcaatgaaagcatcaaggctcaggccaaaacacggcacaaggtgatg
ggagtcctggacatctatggttttgaaatatttgaggacaacagctttgaacagtttatc
atcaactactgcaacgagaagcttcagcagatcttcatcgaactgacgctacgtgaagag
caggaggagtacgtcagagagggcatcgaatggaccaacattgagtatttcaacaacgcc
gttatctgtgacctcatcgagaataaccagaatggtatcttggccatgttggatgaggag
tgtctcaggccaggcacagtgactgatgacaccttcctagacaagctcaacaccatctgt
gctgagcaccagcactttgagagtcgcctcagcaagaactccaagttcctgacagaccac
agcctgcctcacagctgcttccgcatccaacactacgccgggaaagtgctgtaccgcgtg
gagggctttgtagacaagaacaatgacctgctgtacagagacctgtcccaggccatgtac
aaggccacccacagcctgatgagacagctgtttcctgaaggaaaccctgctaaggtcaac
ctgaagagaccccccactgcaggcttccagttcaaggcctccgtagggggactcatgagg
aacctgcagaccaagaaccctaactacatcaggtgcatcaagcccaacgataagaaggca
gcccacatcttcactgactcactggtgtgtcaccaggtgcgttacctgggactgatggag
aatgtgcgtgtgaggagggcaggctacgcattccgccagccctatgagccttgtctggag
cgatacaagatgctctgcaagcagacctggcctcactggagaggacccgccagggacgga
gtggaggtgctgctgaccgactgttctgtttcagctgaggagtttgcctacggacgctcc
aagatcttcatcaggaaccccagaacgctgttcacccttgaggagaggaggagggcgtgt
ctggaggacctggccaccctgatccagaagatctaccggggctggaagtgtcgtactcac
ttcctcctgctgaagaaaagccaggtggtggtagcagcctggtaccgcagatatgcacaa
caaaagaaatatgagaaaatcaagagcgctacactagtgatgcagtccttcaccagaggg
tggaaggcccgcaagatattgcgacagctgaaatatgagaagagatgcaaggaggcagtg
actacaattgcagcgtactggcacgggactcaggctcggatggagctgcggcgcctaaag
acggaggcgcggaataagcgcgctgtgtctgtgatatgggcatactggcaggggaccaag
gctcggcaagaactgcggcgtctaaagaaggaggcgcgagaaaagctcgctgtgtctgtc
atttgggctggctggcaggggaccaaggcacgcagggagctaaggcgcctgaaggaggag
gccaggcgtaagcacgccgtcgctgtcatttgggcctactggcggggactccaggtgcgc
caggagtacaggaaattctttagggccaacgctggcaagaagatctacaactttatcatc
cagagaattatgcagaagtacttcctgggtctgaagactaccatgccctccatgtccccc
atagacaacacctggctggcccagccttacagtttcctggagggagctcacactgagctc
aggaggatcttccacctctggaggtgcaagaagtacaggggccagttcacaaaggagaag
aaggctgtgtatgaggagaaactggaggccagtgagatcttcaaggacaaaaaggctctg
tatcccagcagtgtgagccagcctttcaaaggagattatctggagatccagaagaacccc
aagtaccagaagctgaacagtgctgtggaggagaaggtgctactggctgacgtggtgaac
aagatcaacagggccaacggcaaggggtcaccaaggctcttcttgctgaccaaaagcaac
tttgtactggctgaccagaagacaggccaggtgaaggccagcgtgccgctgccagacctc
accagtgtttcggtcagcactcagagtgacggcttcttcgccctcaagctcaaagagggc
tctgcttcagctgccaaaggtgacttcttgctaagcagtgagcatcttatagagatcatc
accaaactccaccgcacagggaccaccgctgcagacggggaccaaatcaacatcaacatc
tcagacgagttcctggtgcagttcaagcaggacaaggtgtgtgtcaagttcatccagggg
gggcctaagaatggcaccagtgctgcctgcaaacgcaagaacaaccgcctactggaggtg
tctgtgccatcatcgccatag
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integrated database retrieval system