Coregonus clupeaformis (lake whitefish): 121555082
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Entry
121555082 CDS
T08357
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
SH3_2
Ank_4
SAM_2
SH3_9
PDZ_6
Ank_3
Ank_5
PDZ
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121555082
NCBI-ProteinID:
XP_045064339
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All DBs
Position
28:23427134..23591624
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AA seq
1781 aa
AA seq
DB search
MTTTDQHITTTDQYIPVHDYHRPLQTSIDHFGDKWNQQDHFDGTPRPEGCEWTESDPMPL
SPAADAKHDPPERPRQPATTNGNQPGPALARDDGRTSSPDPPDDGSRNSIVIRIGIPDLQ
QTKCLRLDPEAAVWSSKQRVLVTLTQSLTDVLNYGLFQPAFNGRAGKFLDEERLLKDYPL
PPITPIPYLEFRYKRRVYTQSYVDDKQLAKLHTKANLKKFMEYVYQRNVDKVSRFLEKGL
DPNFHDADTGECPLTLAVQLEGSAELIKILRSGGAHLDFRTRDGITALHRAVLSRNHTAL
TTVLALGASPDYRDSRGLTPLYHCAMVGGDPYCCELLLHEHAVIGSTDENGWQEIHQACR
HGNVQHLEHLLFYGADMSSQNASGNTALHLCGLYNQDGCARVLLFRGANKDIKNYNNQTA
FQVAIIAGNFDLAEIIKIHKASDVVPFRESPSYSSKRRRLGGASNVGGCGLSSPRYLIRS
ASDNALESPASSSPGPSLHSLENTQTSNRQTDRRTDTHSLRRQTRRLSPSGRLQRDPSPP
PSPPSPVQRGKRRLYSAVPGRTFIATRSHTPQGPGEISLHRGERVKVLSIGEGGFWEGSV
KGRTGWFPADCVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKSSV
LQKRDSEGFGFVLRGAKAETPIEEFAPTPAFPALQYLESVDLEGVAWRAGLRTGDFLIEV
NGSDVVKVGHRQVVSLIRQGGSQLLMKVVSVTRKPESDLVRKKAPPPPKRAPSTSLTLRS
KSMTAELEEIASARRRRGEKLEEMLTGSQEVVMRKRPSEADYRTATVKQRPTSRRITQQE
INSLFERQGMPVPPGVSLGLEKATMQLPRGMSRTKSFGAPEDDRISALIGEHRFPRSSSM
TDSFIPPPPQTAPPPPPSHYFLDSGPPPAFCPPPPPQRAADQSHSSFKPGAEPRLHDVCD
SPTSRSHAERQRKARSMIILQDSPVPGHLPAEPAPLAPLARPPAGATAPLSRPSPAASPS
PLSRTSPAPSPSPSPLSRTSPAPSPNPPGERSGNRRRGRPVENPYANVGQLPAPPSKPQR
RKSPLLKQLQVEEGPSRAELYQQQVLTERAQIRVMPPQVRRSSFFLSVEGGASEPPPILL
TQSHSVDDLGELPPPIPVLSPSSSPHSTFLHPLTGKPLDPSSPLALALAARERALTARTP
SPEPRPKHTHTPSPEARPKHTHSPSPEPRPKRTPPPLTSPEPRHKRITPPIFLEGQLERP
VVERPETEGGVTSPAVPSPERWQAMPLPPISQVTINITNDSQPAGRGLGEELIEALHGQL
QRRRSLTVGSSEEEGGPYMVTQGQSERRKSLEGGPYTVTLPPALLSSSDEETREELRKIG
LVSPPLAFATPPSPTQPPSSLSLSPRRPQAGEGEGGGGGGSAPDSGVEEGDPHIENTLSL
SSTLAPSLSPTLPCPATPKTLPSSTSDPQSLKPRLRSPLGRGRSALRDPLLKQSSDSELL
PSGCGPGRPPPYLFQRRSKLWGEVSEPRPRQSSPEEGRLTAVGGGGLELASRLQLLSKDS
HSLGEEPAAMDPGRRSPVGGARLFSSLGDVHTISQRGFGGTTYTVRPGSRYPITPRRSPS
PSPSPAPVLPHSPDRSEVSPGRGFGLSSSHHHHTILKSSSLSLPSEPKEVRFVMRSASAR
NRSRSPSPSPHASPCPSPVLGSPLLTLRPWRQRPLALWSKYDVGDWLESVGLAEHRARFQ
EHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALRQLLDN
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgactactacagaccagcacattactactacagaccagtacataccagtacatgactac
cacagaccactacagaccagtatagaccattttggtgacaagtggaaccagcaggatcat
tttgatgggactcccagaccagagggttgtgagtggacagagagtgaccccatgcctctg
agtccggctgccgatgctaagcatgacccccctgaacgtccccggcaaccagccactacc
aacggcaaccagccaggtcccgcccttgccagggacgacgggagaacttcctccccagat
cctcctgacgacggctccagaaacagcatcgtcatccgtattggcatccctgacctgcag
cagacgaagtgtctgcggttggatcccgaagcagcggtgtggagcagtaagcagcgtgtg
ttagtgactctaacacagagtctgactgatgttctaaactacggcctgttccaaccggcc
ttcaacggacgagctgggaagttcctagacgaggaacgactgctgaaagactaccctcta
ccccccatcactcctattccctacctagagtttcgctataagaggcgtgtttacactcag
agctatgtggacgacaagcagctagcaaagctccataccaaggccaacctaaagaagttt
atggagtatgtctaccagcgcaacgttgacaaagtctccaggttcttggagaaaggcctt
gatcctaattttcatgatgctgacacaggagaatgccccctaaccctggcggtacagcta
gagggcagtgcagaactgattaaaattctgaggagtggaggagctcacctggacttcagg
actagagacggaatcacagcgctgcacagagctgttctctctaggaaccacacagcactc
acaactgtgttggccctgggtgcgtctccagactatagggacagtcgtgggttaactcct
ttgtaccactgtgccatggtggggggagacccgtactgctgtgaactgctgctacatgaa
cacgctgtcataggcagcaccgacgagaatggctggcaggagatacaccaggcatgtcgt
catgggaacgtacagcacctggaacatctgctgttttacggagccgacatgagctcccag
aatgcctcaggaaacactgccctgcacctgtgtggtctatacaaccaggacggctgtgcc
agagttctgctgttcagaggagcgaataaagacattaagaactacaacaaccagacagct
tttcaggtggccatcattgctgggaattttgacctggcagagatcattaagatccataag
gcctcagacgtagtgcctttcagagagagcccttcctattcctcaaagcgccgacgtctg
ggtggggccagtaatgttggtgggtgtggcttgtcatctccccgttatctgattcgctca
gccagcgacaacgctcttgaaagccccgcctcttcttctcctggcccctccctccacagc
ctggagaacacgcaaacttccaaccggcagacggacagacggacagacacacacagcctt
cgcagacagacacggcgcctcagccccagtggcaggctacagagggaccccagtccgccc
ccatctccccccagcccagtgcagcgtgggaaacgtaggctgtacagcgccgtgccgggg
agaacgttcatcgctacacgctctcacacaccgcagggtcccggagagattagcctgcat
cgtggggagagggtcaaagtgctgagtataggagaaggagggttctgggagggctcagtt
aaaggacggaccggctggtttcctgctgactgtgttgaagaggtccagatgagacaatac
gacccacgcctagaaacacgagaggatcgcaccaagaggcttttcagacattacaccgtg
ggttcctatgacaactacacttcctacagtgattatgtcatcgaggagaagagttctgtg
ctacagaagagagacagtgaaggatttggcttcgtcctccgaggagctaaagcggagacc
cctatagaggagtttgctccgaccccagcgttcccggcgctgcagtacctggagtctgtt
gacctggagggcgtggcctggagggcggggctacgcactggggacttcctcattgaggtg
aatggtagtgatgtggtgaaggtgggtcacagacaggtggtgtcgttgatccgtcaggga
ggaagccagctgctgatgaaggtggtttcagtcacacgcaaacctgagtcggacttagtc
cgtaagaaagcacctcccccgcctaagagagcacccagcacgtcgctcacactgcgctcc
aaatccatgactgctgaactggaagagatagcctctgccaggaggagacgaggggaaaag
cttgaggagatgctgactggctcccaggaggtggtgatgagaaaacgcccctcggaggcg
gactacagaacggccaccgtgaagcagcggccaaccagcagacgaattactcagcaagag
atcaattctttgtttgagcggcagggcatgcctgttcctccaggtgtttccctgggtctg
gagaaagccaccatgcagctgccccgaggaatgtcccggaccaagtccttcggtgcacca
gaggacgacaggatctctgctctgattggagagcatcggtttccacggagctcctcgatg
actgatagcttcatacctcctcctccccagactgccccccctcctcccccctcccactac
ttcctggactctggcccgccgccggccttctgccccccacctcccccgcagcgagcagcc
gatcaatcacactccagcttcaagccgggggcagaacccaggctgcacgacgtctgtgat
tcgccaacgtctcggagccatgcagagcggcagaggaaagctcgctcaatgatcatcctg
caggactcacctgtaccaggccatctacctgcagagcctgcccccctggcccccctagcc
cgacctcctgctggggctacagcccccctgtcccggcccagccctgctgcctcccccagc
cccctctccagaaccagccctgcccccagccccagccccagccccctctccagaaccagc
cctgcccccagccctaaccctccaggggagcgcagcggcaacaggaggcgtggccggcca
gtagagaacccatatgccaacgtgggccaactgcctgccccccccagcaagcctcagcgc
cgcaagtctccgctgctcaaacagctgcaggtggaggaggggcccagcagggcggagcta
tatcagcagcaggtcctcactgagcgtgctcagatacgggtcatgccccctcaggtccgt
cggtcctccttcttcctgtctgtggagggaggggcttcagagcccccccccatcctactg
acccagtcccactctgtagatgacctgggggagctgcccccccccatccccgtcctctcc
ccctcctcctccccccactccacttttctccacccactgacaggcaagcctctggacccc
tcctcccccctcgccctggccctcgccgcccgtgaacgagctctcactgcacgcacaccc
agccctgaacctcggcccaaacacacacacacacctagccccgaagccagacccaaacac
acacactcacctagccctgagcccaggcccaaacgcacccctcctcccttgaccagccct
gagccccgacacaaacgtatcaccccacccatattccttgaaggacagctggagcggcca
gtcgtagagcggccagagacagaaggcggagtcacatctcctgctgtgccctcccccgag
cgttggcaggctatgcccctccctcccatcagtcaggtgaccatcaatataaccaatgac
agccagccggcaggacggggtctgggggaagagctgattgaggcgctgcatggacaatta
caaaggaggaggagtctgactgttggcagctcagaggaggagggcggaccttatatggtg
acccagggccaatcagagaggaggaagagtctggagggcgggccttacacggtgactctg
ccccctgcactgctgtcatccagtgacgaggagacgagggaggagcttcgtaagattgga
ctggtgtctcctcccctggcgtttgccacgcccccctcccccacccagcccccctcctcc
ctcagcctgtcaccacggagaccccaggcaggcgagggcgagggcgggggaggggggggg
tcagctccagactcaggggtggaggagggagaccctcacatagagaacaccttatccctt
agcagcaccctggcccccagcctgtcccccaccctgccctgccctgccacgccgaaaacc
ctgccctcctccacctcagacccccagagcctgaagcccaggctgcgttctcccctgggc
cgtggtcgctctgctctcagggatcctctactgaaacagtcttcagacagcgagctgctt
ccatcaggctgtggacctggacgcccacctccatacctcttccagaggagatccaaactt
tggggggaggtgtctgagcctcggcccaggcagagtagccctgaggagggcagactgact
gcagtgggtggtggtgggctggagctggcctcacgtctccagttactgagtaaagactcc
cactcactgggggaggagcctgcagcaatggacccaggacgcaggtcccctgttggtgga
gcaaggttgtttagtagtcttggggatgtccacaccatctcccagagaggtttcggtggc
actacctacacagtccggccggggagccgctacccaatcacgcctcgccgcagtcccagc
ccctccccctcacctgcccctgtcctcccccactccccagacaggtcagaggtcagtcct
gggcggggctttggccttagctcctcccatcaccaccacaccatcctcaagtcttctagc
ctcagcttgccttcggagcccaaggaggtccgcttcgtaatgcggagtgccagtgctcga
aaccgctcccgctccccctccccctccccccacgcctccccctgcccctcccccgtactg
ggttcccccctgctaaccctgcggccatggcgccagcgccctctggccctgtggagtaag
tatgatgtgggagactggctggagagtgttggtctggcagagcatcgtgcccgcttccag
gagcatgagattgagggttcccacctccctgccctaaccaaggatgacttcgctgaactg
ggcgtgacacgagtcggacaccgcatgaacattgagcgagcactccgacaactactggat
aactga
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