Coregonus clupeaformis (lake whitefish): 121555084
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Entry
121555084 CDS
T08357
Name
(RefSeq) claudin-10-like isoform X1
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121555084
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121555084
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121555084
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121555084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121555084
04147 Exosome [BR:
cclu04147
]
121555084
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121555084
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121555084
Exosomal proteins of colorectal cancer cells
121555084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
YccF
Motif
Other DBs
NCBI-GeneID:
121555084
NCBI-ProteinID:
XP_041724819
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All DBs
Position
40:1933449..1940657
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AA seq
240 aa
AA seq
DB search
MSDMVIEILAFILTTSGWVLISSTIPTDYWKVSSLDGTVITTATYWSNLWKACVTDSTGV
SNCKDFPSMLALDGHIQVCRGLMIAAVCLGFFGAVFALVGMKCTKIGGSDQSKARMACFA
GVNFILSGLCSLSACSLYAHRITSEFFDPMYVAQKYELGVALFIGWAGSILCVLGGVIFC
FSIVDSSRSSSRTGYAYGGPASTSHVSSHPRGHAQPMSQRPPPEYNSPSRAQHFDKNAYV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatggtgatagagattttggcctttattctgaccacatctggctgggtcctg
atctcctccaccatacccacggattactggaaggtgtcttctctggatggcacggtcatc
accacagctacctactggtccaacctgtggaaggcctgtgtcactgattcaacaggagtc
tccaactgcaaggactttccctccatgctggcactggacggccatattcaggtctgcagg
ggtctgatgatcgctgctgtctgcctgggcttcttcggtgccgtctttgccctggtcgga
atgaagtgcaccaagattgggggatcagaccaaagcaaagccagaatggcttgcttcgct
ggggtcaatttcatactcagcggtctctgctcgctgtccgcatgctccctgtacgcgcac
agaataacatctgagttttttgaccccatgtatgttgctcagaagtatgaactgggagtt
gccttgttcattggttgggcaggatctatcctgtgtgttctgggaggggtgatattctgc
ttctccatagtagacagttccagaagctctagtcgcacaggctatgcctacggaggacct
gcctctacctcccatgtctcttcccacccgagagggcatgcgcagcccatgagccagcgg
cctccacctgaatacaacagcccctccagagcacagcactttgataagaatgcctatgtg
taa
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