Coregonus clupeaformis (lake whitefish): 121555112
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Entry
121555112 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family D member 2 isoform X1
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
cclu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121555112
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121555112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121555112
Enzymes [BR:
cclu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
121555112
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
121555112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
Rad17
ORC-CDC6-like
SMC_N
Adeno_IVa2
AAA_27
RVP
Motif
Other DBs
NCBI-GeneID:
121555112
NCBI-ProteinID:
XP_041724851
LinkDB
All DBs
Position
40:32183312..32203458
Genome browser
AA seq
741 aa
AA seq
DB search
MSKILDAASRVKWDRKTAAKRAIFLAAAAYAVKTLYPIVCKQFVKRKECKNTRGSKGEEN
GSTVGVTLQTDALSHKKSPGVNAEFFKQILELIKILFPKLVSKELGLLSLHSVALISRTF
LSIYVAGLDGKIVKTIVEKEPRSFIIQLMKWLLIAIPATFVNSVIRYLECKLALAFRTRL
VDHAYTTYFTDQTYYKVSNMDGRLTNPDQSLTEDVMMFSQSVAHLYSNLTKPILDVILTS
YTLIQTARSRGANASGPTLLAGLVVFCTAKVLRACSPKFGKLVAEEAHRKGHLRYVHSRI
IANAEEIAFYRGHKVEMRQLQKCYRALAEQMNLILSKRLWYIMIEQFLMKYVWSSCGLVM
VAVPIITATGFADSETADGQTQVLVSERTEAFTTARNLLASGADAIERIMSSYKEVTELA
GYTTRVYNMFLVFGEVQRGVYKRSSTSTTGTGEKKNVARPEMHIDGPLEIKGRVIDVDNG
IVCESVPIITPNGDIVVSSLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYGGLLHK
PSPQHMFYIPQRPYMSIGTLRDQVIYPDSLKDMHDRGYRDKDLEVILDIVNLNQIVTREG
GWDAEMDWKDVLSGGEKQRMGMARMFYNRPKYGLLDECTSAVSIDVEGKIFQAAKDAGIS
LLSITHRPSLWKYHTHLLQFDGEGGWRFEQLDTATRLSLTEEKQRLESSLAGIPKMQHRL
NELCKILGEDSVLKTADTAEE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatacttgatgcagcgtccagagtgaaatgggaccggaagactgcagcgaag
cgagctatctttctcgcggccgctgcctacgccgtgaaaaccctgtaccccatcgtctgc
aaacaattcgtgaaacggaaagaatgcaagaataccagggggtctaaaggagaggaaaat
ggctcgacggttggcgttacattacaaacagatgcactgagtcataaaaagtcgcctggg
gtaaacgctgaattttttaagcagatacttgaactgatcaaaatcctctttccaaagctt
gtctccaaagagctcggattgctatctctgcattcggtcgcgttgatttcccggacgttt
ctgtctatctatgtcgctggcttggatggcaagattgtgaaaacaatcgttgagaaagaa
ccacgcagcttcatcatccaactgatgaaatggctccttattgccatcccggccacattc
gtgaacagcgttatccgctacctcgagtgcaagctggccctcgccttccgcactcggcta
gtggaccatgcctacaccacctatttcacagaccagacctactacaaagtcagcaacatg
gacgggagactgaccaacccggaccagtctcttaccgaggacgtaatgatgttttcccaa
tccgtggcgcatctctactcgaacctcaccaagcccatcttggatgtgatactcacctcc
tacaccctcatccagacggcccggtccaggggggccaacgccagcgggccgaccctactg
gccgggctggtggtgttttgcacggccaaggttctgagggcctgctcgccgaaattcgga
aaactagtagctgaggaggcccacaggaaaggccatttgcgatatgtgcattccaggata
attgccaatgcagaagagatagcattctacaggggtcacaaggtggagatgcgtcagctg
cagaagtgctaccgggccctggcggagcagatgaacttgatcctgtccaagcgtctgtgg
tacatcatgatagagcagttcctcatgaagtacgtgtggagtagctgtggactggtcatg
gtggctgtgcccatcatcaccgctaccggcttcgctgacagcgagactgccgacggtcag
actcaggtgctggtgagcgagaggacagaggctttcaccaccgcacgcaatctcctggcc
tctggagctgacgctatcgagaggatcatgtcctcctacaaagaggtcacagagctggcg
ggctacacaacgcgcgtctacaacatgttcctggtgtttggtgaggtgcagaggggcgtg
tacaagcgttcatccacatcgaccacgggaacaggagagaagaagaacgtggccaggcca
gagatgcacatcgacgggcctttggaaatcaaaggaagagtcatcgatgtggacaatggc
attgtgtgtgagagtgtccctatcatcactcccaatggagacatagtggtctccagcctc
aacttcaaggtggaggaaggtatgcacctgttgatcacaggtcctaacggctgtgggaag
agttctctgttcaggatcctcagtgggctgtggcctgtgtatgggggactgctgcacaaa
ccctccccacaacacatgttctacataccacaaaggccgtacatgtccattgggaccctg
agagaccaggtgatctacccagactctctaaaagacatgcatgacagaggctacagagac
aaggacctggaggtcatactggacatcgttaacctcaaccagatagtgactcgcgagggc
ggttgggatgcagagatggactggaaggacgtgttgtctgggggagagaaacagaggatg
ggcatggctcgcatgttctacaacaggccaaagtacggcctgttggatgagtgcaccagt
gctgtcagcattgacgtggagggaaaaatattccaggctgcaaaggatgctgggatatcc
ttactgtcaatcacccacaggccctccctctggaagtaccacacccacctgttacagttt
gatggtgagggaggatggaggttcgagcagctggacaccgctacgcgtctctccctgacc
gaggagaaacagcgcctcgagtcctcacttgcaggaatacccaagatgcaacacagactc
aacgaactctgcaagatcctgggagaggactcagtcctcaaaacagccgacacagcagag
gagtga
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