Coregonus clupeaformis (lake whitefish): 121555152
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Entry
121555152 CDS
T08357
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121555152
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121555152
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121555152
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121555152
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GFIT
Motif
Pfam:
Glypican
Serglycin
Fz
DUF5856
Motif
Other DBs
NCBI-GeneID:
121555152
NCBI-ProteinID:
XP_041724894
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Position
40:1600554..1750208
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AA seq
560 aa
AA seq
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MLRIRTVLWTLSVALSVAAGADFKAHNCSEVRQASIAKGFSFENVPLQEMSGDHLRVCPQ
ENTCCTSEMEDKFGQQSKLELENLVDETSHELRSTFVSRHKKFDEFFLELLENTERSLNE
MFVRTYGKPYMQNSEVFQNLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVI
TEDYLECISKYTDQLKPFGDVPKKLKAQVTRAFVVARTFVQGLSVGREVASRVSKVSSTP
ACNRALTKMIYCPYCQAMPSVKPCNNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRL
EGPFNIESVMEPIDVKISEAIMNMQDNSVQLSYKVFQGCGQPKPSGMGGRSTRGVSDVFN
ARFRPYSPEERPTTAAGTSLDRLVIDIKEKLKLFKKFWSNLPEDVCQPHRVTAGNATDDD
QCWNGHTKGRYFPEVLKDGLTNQVNNPEVGVDITRPDTFIRQQIMALRVMTNKLKNAYNG
NDIYFQDSSDEGSGSGSGSGCTEACVTEFDFSSTEAPVVGADRSGSGPVEDSAAATHPAP
SAALPASLALSALALHRLWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatacggaccgtcctatggactttatctgtggcgctgtccgttgccgctgga
gcagattttaaagcacataactgcagtgaggttagacaagcttctatcgcaaaaggcttc
agttttgaaaatgttcctctgcaagaaatgtcaggtgaccatcttcgtgtatgtcctcaa
gagaacacctgttgcacctccgaaatggaggacaagtttggccaacagagcaagctggag
ttggagaacctggtcgatgaaactagtcatgaattgcgaagcacctttgtctccagacat
aaaaagtttgatgagttcttcctggagttgttggagaacacggagaggtctttgaacgag
atgttcgtgcggacctacggcaagccatacatgcagaactcggaagtgttccagaacctg
tttgccgagctgaagcgctactacactggaggcaacgttaacctggaggagatgctcaac
gacttctggtcgcgtctgctggagcgcatgttcacgctgctcaactcccagtatgtcatc
accgaggactatctggagtgcatcagtaagtacacggaccagctcaagccctttggagac
gtgcccaagaagctcaaggctcaggttaccagggctttcgtcgtggcacgcaccttcgtc
cagggcctctcggtcggtagagaggtggccagcagggtgtccaaggtgagcagcacccca
gcgtgtaaccgagcgctgaccaagatgatatactgcccatactgccaagccatgccctca
gtgaagccctgcaacaactactgtctgaacgtcatgaagggctgcctcgccaaccaggcc
gatctggacccagagtggaaccagtacatcgatgccatgttgctggtggcacagaggctg
gagggacccttcaacattgagtctgtcatggagcccattgatgtgaagatttcagaggcc
atcatgaatatgcaagataacagtgtccagctgtcctacaaggtttttcaaggctgcggc
cagccaaagccctcaggaatgggcggcaggtctacccggggcgtgtcggatgtgttcaac
gcccgcttcaggccctacagcccagaggagcggcccaccactgcagctggcaccagcctg
gacagactggtgattgacatcaaggagaaactgaagctgttcaagaagttctggtccaac
ctgcctgaggacgtctgccagccacacagggtgacagcagggaatgccaccgatgatgac
cagtgttggaatgggcacacaaagggcaggtatttcccagaggttctgaaagatggattg
acgaatcaggtgaataaccctgaggtgggcgtggacatcaccaggccggacacgttcatt
cgccagcagatcatggctctgagagtgatgacaaacaagttaaaaaatgcctacaatggt
aatgatatctactttcaagactcaagcgatgagggcagtggctcaggcagtggcagtggc
tgcacggaggcctgcgtcactgagtttgacttttccagcaccgaggctccggtagtggga
gcagaccggagcgggagtggcccggtggaggattcagcagcagccacacaccctgccccc
tcagcagccctgccagccagcctggccctctcagccctggcactgcacaggctatggaga
taa
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