KEGG   Coregonus clupeaformis (lake whitefish): 121555184
Entry
121555184         CDS       T08357                                 
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121555184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121555184
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121555184
    Brd4/P-TEFb complex
     121555184
    7SK RNP complex
     121555184
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 121555184
NCBI-ProteinID: XP_041724947
LinkDB
Position
40
AA seq 670 aa
MAACRVSSSKWFFTREQLEATPSRRTGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVSHACLNPQEAPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKGDGSQANDPYPGPSLVHEHSLGDGIPGVSNSTF
SKAAASFPVPLPGHASGPLSLDSIASMQGSSYTFTTPSDWPQDTGGRSEGGGYSLKTDAL
GLQGASLSLHHGSLNPHRPDKTVEFNPTKHEHKAVGGGGKHQQQQPVFPPPPPPAQKMSL
DKYREKHAAELAVQQQRRQTEQQDMEPESRDAYIPSVQSDHRKHMQPHPNPGGSSGTTAP
PLKMKLAMPGQDRLPSDKRDKGGSLKLRLPVPSQGGVASKEELKMKIKVSSERHSSSDEG
GAKSKHSSPLVSKEKHRDHSAHRHHKQHGHSHLHSAQHSGNGRGGLEGPAGVGPALLRSP
LGLGGVEGVAGPALASGSSSSRKRAHPNVAGHNHHSSSKTSKSSKGSAGGLRTSQHPSET
GQEASGEPRP
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggcggcgtgccgggtatcctcgtcgaaatggtttttcacccgggagcagctcgaagcc
acgccgtcccgccgtacgggagtggagccggatagagagctctcttaccgacagcaggcg
gcaaacctcattcaagatatgggccagagactcaacgtctcacaacttacaataaataca
gcaattgtttacatgcatagattttatatgtaccactctttcaccaaattccacagaaat
attatttctccaaccacattattcctagctgcaaaagttgaagagcaacctcggaaactg
gagcatgtcattaaggtttcgcatgcttgtctaaaccctcaagaggccccgcttgatacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggatttgaaataactattgaacatccacacactgatgtggtgaaatgttcc
cagctagtgagagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccacgttctgcctgcagcacaagcccacagtcatcgcctgcgtctgcatc
cacctggcctgtaaatggtccaactgggagatccctgtctctactgatgggaaacactgg
tgggagtacgtggacaactctgtcacactggagctgctcgatgaactgacacatgagttc
cttcagattctggagaaaacgccgagcaggttgaagaggatacggaactggagggccaca
caagctgccaagaagcccaagggagatggctctcaggcaaatgacccctacccaggaccc
tccctggtccacgaacattccctgggagacggcatccctggggtctccaactcaaccttc
tccaaagccgccgcctcgttccctgtccctctgccggggcacgccagtggacccctctcc
ctggactccatagcctctatgcagggcagctcctacaccttcaccacccccagcgactgg
ccccaggacacggggggtcgctcggagggaggaggctattccctcaaaacagatgcacta
ggcctccagggggcttcactgtctctgcatcacggctctctaaacccacacagaccagat
aagaccgtggagttcaaccctactaaacatgaacacaaggctgtagggggaggggggaag
caccagcaacagcagcccgttttccctccaccgcccccgccggcccagaaaatgtccctg
gacaagtacagagagaagcacgctgccgagcttgcggtgcagcagcaacgcagacagaca
gagcagcaggatatggagcctgagagcagggatgcctatataccctctgtccagtcagac
cacaggaaacacatgcagccccaccctaacccagggggcagcagcggcaccactgcccct
cctcttaaaatgaagctggccatgccaggccaggacaggctcccctctgacaaacgggac
aaggggggctcactcaaactccgcctcccagttccttctcaggggggcgtggccagcaaa
gaggagctgaagatgaaaatcaaggtgtcctctgagcgccacagctcttctgacgagggc
ggggccaagagcaaacattccagcccgctggtaagcaaggagaagcatcgggaccactct
gcccaccgccaccacaagcagcacggacactctcacctccattcagcacagcacagcggc
aatggcagggggggccttgaggggccagcgggggttgggccggccctcctccggagcccc
ctggggttagggggcgttgagggggtggcgggcccagcccttgcttctggttccagctcc
tcccgcaagagggcgcaccccaacgtcgccggccacaaccaccactcctcctccaaaacg
agcaaaagctccaagggcagcgcaggtgggctacggacatctcagcaccctagtgaaact
ggacaagaagccagtggagagccgcggccctga

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