Coregonus clupeaformis (lake whitefish): 121555201 Help Entry 121555201         CDS       T08357                                  Name (RefSeq) integrin alpha-V   KO K06487   integrin alpha V Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04081   Hormone signaling cclu04145   Phagosome cclu04148   Efferocytosis cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04514   Cell adhesion molecules cclu04810   Regulation of actin cytoskeleton cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04081 Hormone signaling     121555201    04512 ECM-receptor interaction     121555201    04514 Cell adhesion molecules     121555201  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     121555201    04148 Efferocytosis     121555201   09144 Cellular community - eukaryotes    04510 Focal adhesion     121555201   09142 Cell motility    04820 Cytoskeleton in muscle cells     121555201    04810 Regulation of actin cytoskeleton     121555201  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cclu04131]     121555201   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121555201    04515 Cell adhesion molecules [BR:cclu04515]     121555201    04090 CD molecules [BR:cclu04090]     121555201 Membrane trafficking [BR:cclu04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     121555201 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    121555201   Exosomal proteins of epithelial cells    121555201 Cell adhesion molecules [BR:cclu04515]  Integrins   Integrin alpha subunits    121555201 CD molecules [BR:cclu04090]  Proteins   121555201 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3 LYRIC Motif Other DBs NCBI-GeneID:  121555201 NCBI-ProteinID:  XP_041724978 LinkDB All DBs Position 40:11838842..11929328 Genome browser AA seq 1048 aa AA seqDB search MERLCKLSLSLALILPCLQWTTSFNLDSDKPYVFSGPKGSYFGFSVDFFQPDDKQSNILI GAPRANTSSASTVVERGAVYTCPWQKTGDCTQVQFDNTDDRKNNEGVQMEFKSNQWFGAT VRSHGEHILACAPLYQWSTYSMSEREPVGTCFLKKGVEVVEYSPCRSKANSPDGQGFCQA GFSIDFVKNNRVVVGGPGSFYWQGQLISDDISEIITRFNKQYYTPYSNQLTTKTASAQYD DSYLGYSVTVGDFNADGQDDYITGVPRGDKALGYVNIFNGRNMESMLNFTGTQMAAYFGH SVVAADINNDGLVDLFVGAPLFMERGSDGKLREVGQVSVFLGKGGFSFHSPVTLSGTEIY SRFGSSIATLGDLDMDGFNDIAIAAPYGGPKHQGLVYIHNGRAAGPDPVPSQVLEGRWAS SYMPPSFGYSLHGATDIDQNGYPDLIVGVFGADKAVLYRARPVISVNATLDISPQILNPE EMTCKLPDADTQVSCFKVKYCLKASGRGAPASLKFQVHLVLDRLKHKGATKRVLFLHSKT SQYTKNMTVSNGQGPACEEQEAFLIDDSEFRDKITPISVFMEFSLDYQQAADKTGLLPIV DLTAPTNISKQAHILLDCGDDNICKPDLQLSVLSDQKEIYIGDDNPLTLEVTAENRGEGA YEAELHVFLPPQADFTGVVRNSETLSRLSCAYKTENQTRVVVCDLGNPMKGGTKVLAGLR FSVHQLSEQDTSVKFDLQIQSSNQFSSTSRLVSSITKLAVLAKVDIRGVSVPDQVFLPIA NWQPKDNPVVGDDIGPQILHIYELRNRGPSTFSKAMLDIEWPYRFNNGSLLYITKLEVDG DGGINCSTDMEINPLNVSNPLSGETNGTASTGGDGTEGRNRNHVHRRELERKEMEGDLET LDCSKAQCLKIRCQVGRVERGQSTILFIHSRLGVATFLKTESQNRSFTVRSSASFSVIEM PYNKNLVSELPSNATTISMSVIWVKSEPEPVPGWVVALAVLAGLLLLALLIFIMYKLGFF KRVRPPQEDATEKEQLAPQENGDRNTDA NT seq 3147 nt NT seq  +upstreamnt  +downstreamnt atggagcggctttgcaagcttagtttatctttggctttgatcctgccttgtttgcaatgg acaacttctttcaatctggacagtgacaaaccctatgtattctctggacctaaaggaagt tattttggattttcggtggatttcttccagccagatgacaaacagtcaaacattcttata ggagctcccagagccaacacctcctcagcttccacagtggtggagagaggggctgtctat acctgcccatggcagaagactggtgactgtacccaagtacagtttgacaacactgatgat cgtaagaataacgagggggtccagatggagttcaagtccaaccagtggtttggagccacg gtacggtcacatggtgaacacatcctggcctgtgcacctctctaccagtggagcacgtac agcatgtcagagcgagagcctgtcggaacatgtttcctgaagaaaggagtagaagttgtg gaatactctccctgtcgatctaaagccaactctccagatggacagggcttctgtcaggct ggattcagtattgactttgtcaagaataacagggtggttgttggaggccctggtagtttc tactggcaaggtcagctgatcagtgacgatatctctgagatcataaccaggttcaacaag caatattacactccttacagtaaccagctgaccaccaagactgccagcgctcagtacgac gacagctatttaggttactctgtgactgttggtgacttcaatgctgatggacaagatgat tacattaccggggtacccaggggagacaaagctctgggctatgttaacatcttcaatggg aggaacatggaatctatgctgaacttcacaggaacacagatggctgcctacttcggccat tctgtggtggcggccgacatcaataacgatggcctggtggatctgtttgtaggggcccct ctgttcatggagcgtggcagtgatgggaagctgcgggaggtgggccaggtgtctgtgttc ctggggaagggagggttctccttccactcccccgtcacactgagcgggacggagatctac tcacgcttcggcagttctatagccacactgggagacctggatatggacggcttcaacgac attgccatagctgcaccttacggcgggccgaagcaccaaggcctagtgtacatccacaat gggagggcggcagggcctgacccagttccttcccaggtcctagaggggaggtgggcctcc tcttacatgccccccagctttggatactccctacacggagccaccgatattgaccagaac ggatacccagacttaatagtcggtgtatttggtgcagacaaagccgttctatacagggcc cggccggtcatcagcgttaacgccaccctggacatcagccctcagatcctcaacccagag gaaatgacctgcaaactgcctgacgctgacactcaagtgtcctgtttcaaagtgaagtac tgtcttaaggcgagtgggagaggcgcaccagcctcactgaagttccaggttcaccttgtc ctggacagactcaaacacaagggggcgacaaagagagttctgttcctccacagcaagacg tcccagtacaccaagaacatgacggtcagcaacggccaaggaccagcctgcgaggagcag gaagccttcctcatagatgactctgagttccgggacaagatcactcccatctctgtgttc atggagttcagtttggactaccagcaggctgcagataagaccggcctactgcctatcgtg gatctgactgcccccaccaacatctccaaacaggcccatatcctactggactgtggagat gacaacatctgtaagccagacctccagctgtctgtattgagtgaccagaaggagatctac ataggagatgataaccccttgaccctggaggtgacagcggagaacagaggagagggggcg tacgaggcagagctacatgtcttccttcctccccaggctgacttcactggggtcgtacgc aacagtgagactctgtcgagactgtcctgtgcctacaagacagagaaccagaccagggtg gtggtgtgtgatctggggaaccccatgaaaggaggaactaaggtgctggccggtctgcgc ttcagcgttcaccagctctccgagcaggacacgtctgtcaagtttgacctgcagatacag agttccaaccagttcagcagcaccagcaggctggtctccagcatcacaaagctggctgtc ctcgccaaggtggatatcagaggggtgtcggttcctgaccaggtcttcctgcccattgct aactggcagcccaaagataaccctgtcgtaggagacgacatcggtccacagatactgcac atctatgagttgcgtaacagaggccccagcaccttcagcaaggccatgctggacatcgag tggccctacaggttcaacaacggctctctgctctacatcaccaagctggaggtggacggg gacggaggaattaactgcagtacggacatggagatcaacccgctcaatgtctcaaatcct ctgtcaggagagacgaatggtacagcttccaccggtggagacggtacagaggggaggaac aggaaccatgttcaccgcagagagctggagaggaaagagatggagggagacctggaaacc ctggactgttcgaaggcccagtgcctgaagatccggtgtcaggtgggccgtgtggagaga ggtcagagtactatcctcttcatccactccagactgggggtggccaccttcctcaagact gagagccagaaccgatcgttcaccgtgagatcctccgcttccttcagcgtcatagagatg ccttataacaagaacctggtgtctgagctgccctccaacgccactacgataagtatgtca gtgatctgggtgaaatcggagcctgaacctgtccctgggtgggtggtggccctggctgtg ctggctggactactgctgctggctttactcatcttcatcatgtacaagctgggtttcttc aagcgtgtacgcccgccccaggaggacgccacggagaaggaacagctggcaccgcaggag aacggtgacaggaacactgacgcctga

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