Coregonus clupeaformis (lake whitefish): 121555289
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Entry
121555289 CDS
T08357
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121555289
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121555289
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
121555289
NCBI-ProteinID:
XP_041725036
LinkDB
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Position
11:41673767..41768618
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AA seq
615 aa
AA seq
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MGAREASGNSYLVACWQPILILILATVLSGSSTSCPSRCECNTQERSVMCQRKKLMSVPE
GIPTETRLLDLSKNRIKTINTDEFTAYPNLEELELNENTISAVEPGAFNNLYGLQTLGLR
SNKLKLIQLGVFLGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIIIIKDFSFKRLYRLKVLEIA
YWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHMVGGRLAMIEPYSFRGLNYLKILNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPICASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKLVDEGTTVNFGCQADGDPAPVIMWLSPQKQFIMTKTIGRLTVFPDGTLEVRYA
QVQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENDDNGTQTN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGVS
NSAAETPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggggctagggaagcgagtggaaacagctacctggttgcgtgctggcagcccattctg
attctgatcctggccactgtactgtctggttccagcacaagctgcccatcccgctgcgag
tgcaacacccaggagcgctcagtcatgtgccaacgcaagaagcttatgtctgtccccgag
ggcatccccacagaaacgcggctgcttgacctcagcaagaaccgcatcaagaccatcaac
acggatgagtttaccgcataccccaacctggaggagctggaactcaacgagaacaccata
tcggctgtcgagcccggcgccttcaacaacctgtacggcctgcagacattgggactgcgc
agcaacaagctcaaactcatccagctgggcgtgttcctgggcctcagcaacctcacccag
ctggacatcagtgagaacaagatagtcatcctgctggactacatgttccaggacctgtac
aacctgcgctcactggaggtgggtgacaacgacctcgtgttcatctcccaccgggccttc
catggcctcagcagcctggagcagctgacgttggagaagtgcaacctgacctcggtgccc
actgaggccttcactcacctccacagtctgatctttctcaggctgcgccacctcaacatc
attattattaaggacttctcctttaaaaggctctaccggcttaaagtgctagagatcgct
tactggccctacctggacaccatgacttccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccctacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataaccccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacatggtcgggggcaggctggctatgatcgag
ccctactccttccgaggcttaaactatctgaagatcctcaatgtatctggaaatgctttg
agcaccttggaggagtctgcgttccactcggtaggcaacctggagactctggcgctttac
gacaaccccttggcctgtgactgtcggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccatctgcgcttcacctgagttcgtacagggaaaagagttc
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcgcagcagaaacttgtggacgagggaactacagttaattttggttgccag
gcagacggtgatcctgccccagtcatcatgtggctctccccgcagaagcagttcatcatg
accaaaaccatcgggcggctcacagtattccccgatggcaccctcgaggtgcggtatgct
caggtccaggataacggcacgtatgtgtgcatagccagcaacgctggtggcaacgacaca
tctctcgcccacctgcatgtccacagctactctccagactggccccaccaacccaacaag
acctttgccttcatctccaaccagcccaatgagaatgatgacaatgggacgcaaaccaac
gtccccttccccttcgacataaagaccttaatcatcgccaccaccatgggcttcatatct
ttccttggtgttgtcctgttttgtctggtgctactctttctgtggagcagaggtaaaggg
gccacaaagcacaacatagagatagagtacgtgccacgcaagtcagacgctggagtgagc
aacagtgctgcagagacccctcgcaagtttaacatgaaaatgatttaa
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