Coregonus clupeaformis (lake whitefish): 121555413
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Entry
121555413 CDS
T08357
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121555413 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121555413 (nup107)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121555413 (nup107)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121555413 (nup107)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121555413 (nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
121555413
NCBI-ProteinID:
XP_041725178
LinkDB
All DBs
Position
7
Genome browser
AA seq
1312 aa
AA seq
DB search
MDWDQNELLSPIVRDAEVTRAARRKSSIQKKAQFNFHSPGDDSQGSTTPPARSLLRHTPG
SLFKQSCKSLLFKQSCESLLFKQSCKSLLFKQSCKSLLFKQSCESLLFKQSCKSLLFKQS
CESLLFKQSCKSLLFKQSCKSLLFKQSCKSLLFKQSCKSLLFKQSCKSLLFKQSCESLLF
KQSCKSLLFKQSCESLLFKQSCKSLLFKQSCESLLFKQSCKSLLFKQSCKSLLFKQSCKS
LLFKQSCKSLLFKQSCKSLLFKQSCKSLLFKQSCESLLFKQSCKSLLFKQSCKSLLFKQS
CESLLFKQSCESLLFKQSCKSLLFKQSCKSLLFKQSCKSLLFKQSCESLLFKQSCKSLLF
KQSCKSLLFKQSCESLLFKQSCESLLFKQSCKSLLFKQSCKSLLFKQSCESLLFKQSCKS
LLFKQSCKSLLFKQSCKSLLFKQSCESLLFKQSFTPKSAARNPDVSAILATGGRTPRFIH
TPRPPLGSMSVNLDESDWTNSLYPSPLSGLGLGNASFTDDINMSSVMLKEEDPGEAASVS
LFPEFLHSYLRHSSSAVFDLLEEYEAICQDKVGMLQRLVSRAAPGQQKSSKTAGIRWLLQ
QEMVTWRLITSLYRDRIQSELEDDIMMDVAAPSVSEKEVMEQLFQRDAVVRQSQLVVDWL
ESIAKDEIGDFSDNIEYYAKSVYWENTLHALKQRRNASSTGFNVPLVTELDPDAPIRQKR
PLADLDREDDARLLKYLFTLLRAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDPNINGGG
AELLPVEGNPHRCVWKVCCWRMADDEHFSRYERAIYAVLSGNLKRLLPVCESWEDSVWAY
FRVLVDSLVEQEVRSSGMGSEELEELPREYLEANWTLEKVFEELLATESKKVLEETKEHY
HIIQKLVILGDLDGLLEEFSNWLTRSPALPSHLLRFMTHLLLFYRSLGMQLKEEVSVDVL
KAYVSLLMREKQVDLIAFYVSHLPSDIGTAQYAHFLEEVAEADQRQRCLELAREAGLDVA
AVTKMVVENIRERDTEDFAHHDLTPALDTGTSAEDQRKIDVIDWLVFDPAQRAEALKQSN
GIMRKFLASKKHDAAKEVFGKVPEDSMREIYRQWEELGLDTPLPAEDENAIREHLCIRAY
LEAHEAFNEWFHHMNSPPQKPSPPAQAKFTEKVAFEMKEKEYQMEHDNWTGRLEALTEDV
KERIYNVLLFVDGGWMVDVREDTEEDPERGHQMVLLRRLCLPMMSFLLQTVLQRTQRHQE
SLRLADIIASDQHRLYEVFSKDELRKFLQKMRESSLLLLDKNLDPLGYEIQP
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccagaatgagttgctgtcgcctattgtacgggatgctgaagtgaccaga
gcggcacgccgaaagagttcaattcagaagaaggctcaattcaacttccattctcctggt
gatgacagccaaggtagtaccaccccacctgcccgctccctgctccgccacacacctgga
tccctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtgagtctctcctc
ttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaagtctctcctcttcaaa
cagtcctgtgagtctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcc
tgtgagtctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaag
tctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaagtctctc
ctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtgagtctctcctcttc
aaacagtcctgtaagtctctcctcttcaaacagtcctgtgagtctctcctcttcaaacag
tcctgtaagtctctcctcttcaaacagtcctgtgagtctctcctcttcaaacagtcctgt
aagtctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaagtct
ctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaagtctctcctc
ttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtgagtctctcctcttcaaa
cagtcctgtaagtctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcc
tgtgagtctctcctcttcaaacagtcctgtgagtctctcctcttcaaacagtcctgtaag
tctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaagtctctc
ctcttcaaacagtcctgtgagtctctcctcttcaaacagtcctgtaagtctctcctcttc
aaacagtcctgtaagtctctcctcttcaaacagtcctgtgagtctctcctcttcaaacag
tcctgtgagtctctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgt
aagtctctcctcttcaaacagtcctgtgagtctctcctcttcaaacagtcctgtaagtct
ctcctcttcaaacagtcctgtaagtctctcctcttcaaacagtcctgtaagtctctcctc
ttcaaacagtcctgtgagtctctcctcttcaaacagtccttcaccccgaagagcgctgcg
aggaacccagatgtgtcggccatcttggcgaccgggggcaggactcctcgcttcatccat
acaccacgacctcccctgggaagtatgagcgtgaacctggatgaaagtgattggaccaac
agcctgtatccttctcctctgtctgggctggggctggggaacgccagctttactgacgac
atcaacatgtcctcggtcatgctgaaggaggaggatcccggagaggctgcatcagtgagt
ctgttcccagagttcctccattcctatctcagacactcatccagcgctgtctttgacctg
ctggaggagtatgaagccatctgtcaagataaggtgggcatgctccagaggctggtatcg
agggcagcgccagggcaacagaagtcctctaagaccgctggtatcagatggcttttacag
caggagatggtcacctggcgcctcatcacttctctatacagagacaggatccagtcagag
ctggaggatgacatcatgatggatgtggctgctcccagtgttagtgagaaggaggtgatg
gaacaactcttccagagagatgctgtagtgcggcagagtcagctggttgtggattggttg
gagagtatcgccaaagatgaaatcggggacttctctgacaacattgaatactacgccaag
tctgtgtactgggagaatacccttcatgctctgaaacagaggagaaacgcatccagcaca
ggcttcaatgttcccctggttactgagctggaccctgacgcccccatcagacagaagcgt
cccctggcagacctggacagggaggatgacgccaggctgctgaagtacctgttcaccctc
ctcagagcgggcatgacggacgaggcccagaggctgtgtaagcgctgtggacaggcatgg
agggctgctactctggaggggtggaagctttaccacgaccccaacatcaacggaggcggt
gcagagctgctaccagtggaggggaaccctcaccgctgtgtatggaaggtgtgctgttgg
aggatggctgacgacgaacacttcagcagatatgagagagccatctacgctgttctgagt
gggaacctcaaacggctgctcccagtgtgtgagtcgtgggaggacagtgtgtgggcctac
ttcagggtcctggtagactctctggtggaacaggaggtcaggtcctcaggaatgggcagc
gaggagctggaggagctgccacgagaatacctggaggccaactggacactagagaaggtg
tttgaggagctgctagcaacagagtcaaagaaagtcctggaggagactaaagaacattac
cacatcatccagaagttggtcatcctgggagacctggatggtctcctggaggagttcagt
aactggttgaccaggagtccagctctgccctctcacctgctgcgattcatgacccacctg
ctgttgttctaccgtagcctgggcatgcagctcaaggaggaggtgtcggtggatgtcctg
aaggcctacgtctctctgttgatgagggagaagcaggtggatctgatcgccttctatgtc
agccacctgccgtcagacattggcaccgcccagtacgctcacttcctggaggaggtcgcc
gaggctgaccagagacaacgctgtctggagctggccagggaggcaggtctggacgtggca
gcggtcactaagatggtggtggagaacatcagagagagagacactgaggacttcgctcat
catgacctcacccctgcactggacactggcacctcagcggaggaccagaggaagatcgat
gtgattgattggctggtgtttgaccccgcccagagagctgaggccctcaaacagagcaac
ggcatcatgaggaagttcctggcctctaagaaacacgatgcagccaaggaggtgtttggt
aaggtcccagaggactccatgagggagatataccgccagtgggaggagctaggcctggac
acgccccttcctgcagaggatgagaacgccatcagggaacacctgtgtatccgcgcttac
ctggaagctcatgaggcgttcaatgagtggttccatcacatgaactccccccctcagaag
cccagccccccggcccaggccaagttcactgagaaggtggccttcgagatgaaggagaag
gagtaccagatggaacacgacaactggaccggccgtctggaggctctgactgaagacgtg
aaggagagaatctacaacgtcctgctgtttgtggacgggggctggatggtcgacgtccga
gaggatacggaggaggacccagagagaggccaccagatggtgctgctccgtagactctgt
ctgcccatgatgtccttcctgttgcagacggtactgcagagaacacaacgccaccaggag
agtctcagactggctgatatcatcgcctcagaccaacaccgcctctatgaggtgttctcc
aaggatgagctgaggaagttccttcagaagatgagggagtcgtctcttctcttattggat
aagaatctggacccgctggggtacgagatccaaccataa
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