Coregonus clupeaformis (lake whitefish): 121555455
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Entry
121555455 CDS
T08357
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121555455
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
121555455
NCBI-ProteinID:
XP_045073305
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Position
Unknown
AA seq
821 aa
AA seq
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MTWRLLVLGGACLLLLGVGGQCKEQRNRRTVSFHRTQQFANHRKVLSRPERDTIVSPSPT
FTACKLRLTPLEHRVLDQNTHETGFHGDDGSSFTVTWVGDGTGVILVLSTVSAPIDSFFE
GGSSRLYRSSDYGKSFHDISHLINNTFIRKEFGLQAGPGNSQQVILTADTPVLDNPGGVL
FTSTDAGVSFKSVQLPFHPAQPITFHFLNPEYLVVISIDGGLWLSLDFGAVWTKVHEGTQ
SFTWGSGITLFFSFSPKGTVEADRRGELLLKRTEDLGKTFTTVLHSIFSFGYVGGFLFTS
VIETLGAPRVIYVSSDQGDHFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGEESYFGT
VYTSDDRGIVYSKSLERHLFGGEGKSDFTNVTSMRGVYLTNILEEDGRIRTVISFNRGGE
WKLLNKPQNVECGEDSRNDCNLHIHGEHSHYNGITPMLPLSDPTAVGLVIAHGSVGDSIS
SARPDVYVSEDGGYKWRGALRGAHHYSILDSGGLVVAVEAHPRDGQINTIKFSTDEGQCW
KVYNFTEQPIFFAGLTSEPGTKTMNISVWGYRPEDDDQPMWVVVTIDFRSLITRECGNQD
YVQWLAHATEGGDSATEGCVLGYKVIFRRLRKLSVCRNGRDYVVSRQKSPCPCTREDYLC
DYGYYRHENSSECMRQLDTADHAQEVCLNGEEEELRTSGYRKVPSDRCEGGFTPLRREET
VNRHCGNSSQPPTASPYSETPREKMVLIVVCVGVGIVILVAVAIAVYTVRRMVYGNRAPT
YRFSFLQLQDDDRSIAANPESVTTSNGTSVFQVDSDDDLIE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacttggagacttttggtcctcggtggggcatgcttgcttcttctgggtgtggggggt
cagtgcaaagagcaacgaaaccggagaacggtgtctttccatcggactcagcaatttgcg
aaccaccgcaaagtcctctcacggccagaaagggataccatagtttctccaagtcccact
ttcaccgcttgtaaactccgtcttacaccattagaacacagggtgttggatcaaaataca
cacgagacagggtttcatggtgatgatggctccagttttactgtcacatgggttggagac
gggacaggagtaatcttggtgttgtctacagtcagtgctcctatagactccttcttcgag
ggcggttcttcacgactgtaccgcagttcagactatggcaagtctttccatgatatttct
catctcatcaacaacaccttcataaggaaggaatttggacttcaggctggaccagggaac
tctcagcaggtgattctgactgcagacacaccggtcttggacaaccctggtggcgtcctc
tttacctcgactgacgccggagtgtcctttaagtctgtccaactgccctttcacccggcc
cagccaatcaccttccacttcctgaatcctgaatacttagtggtcatcagcattgatggc
ggcctgtggctttctcttgactttggggctgtgtggacaaaggttcacgagggaacacaa
tctttcacgtggggctccggcatcactctcttcttcagcttcagtcccaaaggaacagtg
gaggcagacagaagaggagagctgctcctgaagaggacagaggacctggggaagacattc
accaccgtgctacacagcatcttctccttcggctatgtaggaggcttcctcttcacctca
gtcatagagacactgggagccccacgtgttatctatgtgtcctcagaccaaggggaccac
ttcaacaaggcccagcttccctccgcctccaccgagcagttctactcggttctggatggg
gatgaggatatgatcttcatgcatgtggacaatccgggagaggaaagctactttgggacg
gtgtacacgtcagatgaccggggcatcgtgtactctaagtctctggaacgccacctgttt
ggtggggaagggaagagcgacttcaccaatgtcacctccatgagaggagtctacctcacc
aacatactggaggaggacggccgcattcggacagtcatttcatttaaccgagggggcgag
tggaaactcctcaacaagccccagaatgttgagtgtggcgaggattcaagaaatgattgt
aacctgcacatccacggcgagcacagtcactacaacggcataactcccatgctgcctctc
tctgaccccaccgccgttggccttgtcatcgcccacggcagtgtgggggactccatctcg
tcagcacggcctgatgtgtacgtgtcggaggacggggggtacaagtggaggggtgcgctg
aggggggcccatcactacagcatcctggactctggggggctcgtcgtggctgtggaggcc
caccccagggacggccaaatcaacaccatcaagttctccacagatgagggccagtgttgg
aaggtgtacaacttcacagagcagcccatcttcttcgctggcctgacgtccgagccgggc
accaagaccatgaacatcagcgtgtggggttaccggcccgaggacgatgaccagcccatg
tgggtggtggtcaccattgacttccggagtctcatcaccagagagtgtggtaaccaggac
tatgttcagtggttggcccatgccacagagggtggggactcggccacagaagggtgtgtc
ttgggctacaaggtgatcttcaggaggctgaggaagctgtccgtctgcaggaatggacgg
gactacgtagtgagcaggcaaaaaagcccctgcccctgcaccagagaggactacctatgt
gactatggttactatcgccatgagaacagctcagagtgtatgagacaactggacactgca
gaccacgcccaggaggtgtgtctaaacggagaggaggaggagcttaggacatcagggtac
cgtaaggttcccagtgataggtgtgagggaggtttcactcccctgcgtagagaggaaaca
gtcaacaggcattgtgggaactccagtcagccgcccactgccagcccatactctgaaacc
ccgagagagaagatggtgttgatcgtggtttgcgttggagtagggattgtcattctagtg
gctgttgccattgctgtctatactgtaaggagaatggtctatggaaatagggcgccaacg
tatcgcttctctttcctgcagcttcaggacgacgaccgctccattgccgccaacccagaa
agcgtcaccactagcaatggaacatcagtcttccaagtggattcagatgatgatcttatt
gaatga
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