Coregonus clupeaformis (lake whitefish): 121555526
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Entry
121555526 CDS
T08357
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121555526
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121555526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121555526
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121555526
Factors involved in mRNA localization
Other mRNA localization factors
121555526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
121555526
NCBI-ProteinID:
XP_041725283
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVESDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaacgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccgccctcatccatcatgtaccaggct
aactttgacacaaactttgaggacaggaatgcgtttgtgacggggatagctcgctacatc
gagcaggctactgtccactctagcatgaatgagatgctggaggagggccatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaacgag
cagcccaacagggtggagatctatgagaagacagtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtacttccagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctgtgccacgctgagcggaggaaagattttgtttctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgatgaactcaagaacatgaagtgcagc
gtcaagaacgaccactctgcctataaaagggcagctcagttcctgaggaagatggccgac
cctcagtccatccaggagtcacagaacctctccatgttcctagccaatcacaaccggatc
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
atcgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagcgagaaa
cacatgctgctcaaggtgatgggtttcggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaagttcttcaag
ctccaggtggtgcctctgtttggagacatgcagatagaactgtcacgctacatagagacc
agtgctcactatgaggaaaacaagtctaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgacgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggcctggacagtcagaag
tcagacgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcatggaagttggtccacccgacagataag
ttctgtaacaaggactgtcccggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaaggggctgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcaatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaaaggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcaagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagccgataagagtggttctaagaagactctacgcagc
agtctggacggaccaatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcactgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagctgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaaactggcagaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcggagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagaccctgctcaaacagagacacgtacagctcctgggtcgctccatc
gatctgaaccgtctgatcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagccgctttgagagtgaagacctcacctccatagtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctctcgaagcacatgaccctggacagctttgac
gccatgttccgcgaggccaaccacaatgtgtccgccccctacggacgcatcacgctccat
gtcttctgggaactaaactttgacttcctccctaactactgctacaacggctccaccaac
cgcttcgtgcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcccacatctat
agctcttacaggaacttcgtaggcccgccccacttcaagaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggaactgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgattgaggtaatgcccaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgctgagctgaagactgatgtcttccagagtctcagggaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacctg
cttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaaatatgctcctctccacctggtgcccctc
atcgagaggctggggacccctcagcaaatagccatagcccgtgagggggatctgttgacc
aaggagcgtctttgctgtggcttgtccatgttcgaggtgatccttacaaggatccgtagt
ttcctgcaggacgctgtgtggcgaggcccgccccccaccaacggcgtgatgcacgttgac
gagtgtatggagttccaccgcctctggagcgccatgcagtttgtttactgcatccccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgacgggctgaactgggcaggctgc
tccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacggcaaggacgagatcatcaagaacgtgccgctgaag
aagatggctgatcgcatcaggaaataccagatcctgaacaacgagatctttgccatcctc
aacaagtacatgaaagctgtggagagcgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacatgctga
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integrated database retrieval system
