Coregonus clupeaformis (lake whitefish): 121555533
Help
Entry
121555533 CDS
T08357
Name
(RefSeq) glutamate receptor 1 isoform X3
KO
K05197
glutamate receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121555533
04082 Neuroactive ligand signaling
121555533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121555533
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121555533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121555533
NCBI-ProteinID:
XP_041725296
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MQRSFTLLYTSFLGMCLGSSFPSNINIGGLFPTESHEYEVFRFALSHHQDIPKLVPQVDM
VKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHVCFVTPSFPIETANQF
VIQLRPELQDTLVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAERSWLVTSVNVETMT
EASFLKVFQDLDKRKEGQIIIDCETGRLTSILKKIVEQGKNAKSYHYILANLGFLDIDLT
DLRKGGANITGFQLVNYTEQNVSRTIQQWMEFENKDTKFPKRRLKYTGALTYDGVKVMST
AFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFNEKGRRT
NFTVSIMELAPSGPKKVGYWNGEERYVSTATFMRASNDSSYGLQNRTYIVTTILESPYVM
LKKNHDQLSGNDKYEGYIVELAAEIAKHVGYHYKLKVVSDGKYGARDPETKMWNGMVGEL
VYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM
CIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGADPQTPTQPTGPGAGQQSGLSPGQQGQN
QQNQEQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA
AFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSV
FVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSS
LRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRTESQRMKQNINDAMHCSTMTRMGGNGNGTGTGTGTGEEERMD
AS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcttcaccctcctgtacaccagttttctggggatgtgcttgggttcaagt
tttccaagtaacatcaatatagggggactattcccaaccgaatctcacgaatatgaggtg
tttcggttcgcgctctcgcaccaccaggatatccccaaactggtgccgcaggtggatatg
gtcaagatgggcaacagcttctccatgacatatgccttctgttcccagttctctaaaggt
gtctatgccatcatcggtctctacgacaggaagacagtcaacatgttgatgtcgttctgc
ggagcgctgcatgtgtgtttcgtcacgccttccttccccatcgagacggccaaccagttt
gtgatccagctgagacccgagctacaggacactctggtgggggttatagaccactatgga
tggaccaagttcgtctacatgtacagctcagattctggcctgtcagtgctgcaaaaggtc
ctggacacggctgctgagaggagctggctggtgacgtctgtcaacgtggagaccatgacg
gaggcctcgttcctcaaggtgttccaagacctggacaagaggaaggagggacagatcatc
atcgactgtgagaccggaagactcacctccatcctcaaaaagatcgttgaacaggggaag
aacgctaagagttaccactacatcctggccaacctgggttttctggacattgacctaaca
gacctgaggaaaggcggggccaacatcacaggcttccagctggtcaactacacagagcag
aacgtcagccgtaccattcagcagtggatggagttcgaaaacaaagacaccaagttcccc
aagagacgcctgaagtataccggagcgttaacatatgacggggtgaaggtgatgtctaca
gcgttccagaaccttcggaaacagaggatagacatctctcgccgtggcaacgcaggcgaa
tgcctagccaacccgccggcaccctggggccaaggcatagatatacagagagccctgcaa
caggtgcgtatcgatggcctgactggtcatatccagttcaatgagaaaggacgcaggacc
aacttcaccgtcagtatcatggagctagccccctctggacctaagaaagtgggctactgg
aacggggaagagcggtacgtgagcacagccaccttcatgagagccagcaatgacagcagc
tacggcctacagaacaggacctacatagttaccaccatcctggaatccccatacgtgatg
ttgaaaaagaaccatgatcagctgtcagggaacgataagtacgagggttacatcgtggag
ctagccgctgagatcgccaagcacgttgggtaccactacaaactgaaggtggtctctgat
gggaagtatggagccagagaccccgagaccaagatgtggaacggcatggtcggagagctt
gtgtacgggaaagcagacgtggcggtagccccgctaaccatcaccctggtccgagaagag
gtgatcgacttctccaagcccttcatgtctttgggcatctccatcatgatcaagaagccc
accaagtctaaaccaggtgtcttttccttcctggacccactggcctatgagatctggatg
tgtatcgtgtttgcctacatcggtgtgagcgtggtcctgttcctggtgagccgcttcagc
ccctatgagtggcacgcagaggactatgaggagggggctgacccccagacccccacccag
ccgacggggcccggtgctgggcaacagtcggggctgagccctggtcagcaaggccagaac
cagcagaatcaggaacagaccaacgagtttggcatcttcaactctctctggttctccctg
ggagccttcatgcagcagggatgtgatatctcacccaggtctctgtcagggcgaatagtg
ggtggcgtgtggtggttcttcaccctcatcatcatctcatcctatacggccaacctggct
gctttcctcacggtggagaggatggtttcccccatagagagtgctgaggacctggctaaa
cagactgagatcgcctacggaacactggatgctggttccaccaaagagttcttcaggcgg
tctaagattgcagtgtttgagaagatgtggtcgtacatgaagtcggccgacccctcagtg
tttgtgaagaccacagacgagggagtgatgagggtcaggaagtctaaagggaagtacgcc
tacctgttagagtccaccatgaacgagtacatcgagcagaggaaaccctgtgacaccatg
aaggtcggggggaacctggactctaaaggatacggcatcgccacgcccaagggctcctcc
ctcagaaaccctgttaacctggccgtgttaaaactgaacgagcaaggcctgttggacaaa
ctgaaaaacaaatggtggtacgacaagggcgagtgtggcagcgggggcggggactccaag
gataagacgagtgcgttgagcctgagcaacgtggccggagtgttctacattctgattgga
gggctaggcctggccatgctggtggcgttggtggagttctgctacaagtcgcgaactgag
tctcagagaatgaagcagaacatcaatgacgccatgcactgctccaccatgaccagaatg
ggcgggaacgggaacggaacgggaacgggaacgggaacgggggaggaggagagaatggac
gcatcctaa
DBGET
integrated database retrieval system