Coregonus clupeaformis (lake whitefish): 121555559
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Entry
121555559 CDS
T08357
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121555559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121555559
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121555559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Rad17
AAA_5
AAA_21
AAA_7
AAA_29
AAA_28
AAA_25
Zeta_toxin
DUF5862
Motif
Other DBs
NCBI-GeneID:
121555559
NCBI-ProteinID:
XP_041725330
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MGREDGGIPDSLPTIPEGYPKLAIDEDKKPQERMTEGLPTVDTERKPKKGLGRKKKEPAK
AVGFFQLFRYATGCEVLLMIIGLLCAALHGIALPLMCVVFGQMTDSFVQSGQRLNVTANL
TVEEISALLNSTDGCIQIPGVDIEALMTRHAYYFIGIGCAVFLLGTFQVMLFLLTATKQT
KRIREKYFHAILHQQMSWFDTHQIGVLNVRLTDDINTINEGLGDKICVFVQFFCTFLSGF
IIGFIFGWKLTLVILAVSPLLAGSAAVWSKILATLTSKELSAYAKAGAVAEEILVAIRTV
VAFNGQKKAVERYENNLEDAKNFGIKKAITTNVSMGFTQFVIFGTYALAFWYGTKLSVDE
PENYTIGKTITVFFSVMIGSFSLGQGAPNLEAIAKARGAAYEVYNTIDQPRPIDSSSKEG
HKPDCVKGDIEFKNIHFSYPSRKDVKILQGVNLTVPRGKTIALVGASGCGKSTTIQLLQR
FYDPDSGEITLDGRDIRTLNVKWLRENMGIVSQEPVLFGTTIAENIRYGREDATDEDIER
AVREANAYDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEATSALD
TQSESVVQAALDKARAGRTTIVIAHRLSTIRTADVIAGFSNGEVVEQGTHRELMARKGVY
YSLVMQQSQGKPEEDEENPVEEEDNPPKYEDLDDVLYDSSDMDELEVVNEEGIENGGFER
NSISSGRVEMRPTKKKSKKSKKDKKKEEKPEEAPDVPFTRILALNKPEWPYLLVGTLSSL
VGGAVYPCVAIIFAKIIGVFAEVDPEVKRQRTMMFSLLFLLIGGVAFVTYFLKGYMFGKS
GELLTMRLRRQVFLAMMRQEIGWFDDNNNAVGVLTTRLATDASLVKGATGSRLGLATNTV
CALTIAIVVAFIHSWQLTLLILACVPFLIGANIIQMRAMAGHASKDQGALEQSGKISTET
VENFKTVVGLTREDVFFHKFMDSLERPYKNGLVKAPIYGLTFAIAQAIPYMVNAAIFRFG
SWLIAHCYTEYENVFLVFSVIIFAAMNIGESASFAPDFAKAKAAAGRILGLLEKKPEIDI
YSEEGGKPTDIAGDIEFRGIHFAYPTRQNVRVLQGLNVSVGPGQTLALVGESGCGKSTSI
QLLERFYSPAEGQVLVDGLDTKSLNLSWLRSQLGLVSQEPILFDCSISENIQYGDNSREV
SQDEIEEAAKNANIHNFIMGLPEKYNTRVGDKGTQMSGGQKQRIAIARALVRQPKVLLLD
EATSALDTESEKIVQQALDAARQGRTCIVIAHRLSTIQNADQIAVIQYGQVTEQGTHADL
MAKEGAYYALVNAQVTH
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaggatgggggcataccagactctctaccaaccatccctgagggttacccc
aagctggccatcgatgaggataagaagcctcaggagcggatgacagaggggctgccaact
gttgacacagagcgcaagccaaagaagggcctgggaaggaagaaaaaagaacctgcaaaa
gcagttggatttttccagttgttccgctacgccacgggttgtgaggtgctcctaatgata
atcggcctgctatgtgctgccctccacgggatagcgctgccccttatgtgtgtcgtgttt
ggacagatgaccgacagctttgtacaaagtggacagcggctcaacgttacagccaatttg
actgtggaggagatcagtgctttattgaactcaactgacggatgtattcaaattcctgga
gttgacatagaggctctaatgactcgacatgcctattacttcatcgggatcggttgtgct
gtgttcctgctggggacctttcaggtgatgttgttcttgctgacagccaccaaacagacc
aaacggatccgggagaaatacttccatgccatcctccaccagcagatgtcctggtttgat
acacaccagataggagttctcaacgtcaggttgacagatgacatcaacacaatcaacgaa
ggccttggagacaagatctgtgtgtttgtgcagttcttctgtaccttcttgtcagggttc
atcattggtttcatctttggctggaagctgacccttgtcatcctggccgtcagtcctctc
ttggcaggatcagctgccgtctggtccaaaatacttgccaccctgaccagtaaggagctg
tctgcctatgccaaagcaggggcggtcgctgaagagatactagtggctatcaggacagtt
gtggctttcaatggacagaagaaagctgtggaaaggtatgaaaacaacttggaggatgct
aaaaactttggaataaagaaggccatcaccactaatgtgtccatgggcttcacccagttc
gtcatatttgggacgtacgccttggctttctggtacgggaccaagctctctgtggacgag
cctgaaaactacaccattggaaaaaccattacagtcttcttctcagtgatgattgggtcg
ttctctttgggccagggtgctcctaacttggaagccatcgccaaagcccggggtgctgcc
tatgaagtctacaataccattgaccagccgcggcccatagacagcagttcaaaggaaggt
cacaaaccagactgtgtgaaaggagacattgaattcaagaacatccacttcagctacccc
tccaggaaagatgtcaaaattcttcaaggagtgaatctgacagtgcctcgtgggaagacc
atagctctggttggagccagtggatgtgggaagagcaccaccattcagctgctgcagcgt
ttttatgatccagactcaggagagattaccctggatggtcgggacatccggaccctgaat
gtgaagtggctgagggagaatatgggtatcgtcagtcaggaacctgtgctattcggaaca
accatcgcagagaacatccgctacggcagagaagatgccacagacgaggacatcgaacgg
gccgtgagagaggccaacgcatacgacttcatctccaagctccccgataagctgaacacc
atggtgggggagcggggagcccagctcagtggaggacagaagcagaggattgccatcgcc
cgggccctggtcaaaaatccaaagatcctcctgctggacgaggccacatccgccctggac
acccagagtgagtcggtcgtccaggccgctctggataaggccagggcgggccgcaccacg
atagtgatcgcccaccgcctgtccaccatcagaacagctgacgtgatcgctggcttcagc
aatggggaggtggtggagcagggaacacacagggaactcatggccaggaagggagtctac
tactctctggtcatgcagcagagtcaagggaagccagaggaagatgaagagaaccctgtg
gaagaagaggacaaccctcctaaatatgaggatctggatgatgtcctgtatgactcttct
gacatggatgagctggaagtggtaaacgaggaaggaatagaaaatggcggctttgaaagg
aactcaatcagcagtggccgcgtggaaatgagaccgaccaagaagaaatctaagaagtcc
aagaaagacaagaagaaggaagagaaaccagaggaagctccagacgtccccttcaccaga
atcctggccctgaacaagcctgagtggccgtacctgttggtaggaaccctgtctagcctg
gtggggggagccgtttatccctgcgtcgccatcatcttcgccaagatcattggagtgttt
gctgaggttgacccggaagtcaaacgacagagaactatgatgttttcactgcttttcctt
ctcatcggaggagtggcttttgtcacctacttcctaaagggttacatgtttggaaaatca
ggggaacttcttaccatgaggctgaggaggcaggtattccttgccatgatgagacaggag
attggatggtttgatgacaacaacaatgcagtgggagttctaaccaccagattggccaca
gatgcatcactggtaaaaggggcgactgggtctaggttgggtctggccaccaacacagtg
tgtgctctcaccatcgccatcgtggtggccttcatccacagctggcagctcaccctcctc
atcctcgcctgtgtgcccttcctcatcggagccaacatcattcagatgagggccatggca
ggccacgcctccaaagaccagggtgccctggaacagtctgggaagatatctactgagacc
gttgaaaacttcaagacggttgttggattgacacgggaggatgtcttctttcacaagttc
atggacagtctagaaagaccatacaagaacggtttggtgaaggcacccatctacggacta
acatttgccattgcccaagcaatcccttacatggtcaacgctgcaatcttccgttttggg
tcctggcttattgctcactgttacacagaatatgaaaatgttttccttgtgttttccgtg
attatatttgctgccatgaacataggagagtctgcgtcttttgctcctgactttgccaag
gcgaaagcagcagcagggagaattcttggcttgttggagaagaaaccagagattgacatt
tacagtgaggagggagggaagccaacggacattgccggggacattgagttccgagggatc
cactttgcatacccgacccgtcagaacgtaagggttctccaggggttgaacgtgtcagtg
gggcctggtcagaccctggcgctcgtcggggagagtggctgtgggaaaagcacctccata
caactactagagcgcttctatagccctgctgaaggacaagtgttagtggatgggttggat
actaagagcctgaacctgtcgtggctgaggtctcagctgggcctggtgtcccaggagccc
atcctgttcgactgcagcatctcagagaacatccagtacggggacaacagcagagaggtc
tcccaggacgagatagaggaggcagccaagaacgccaacatccacaacttcatcatgggc
ctgccagagaaatacaacaccagggttggggacaaggggacccagatgtctggaggtcag
aaacagaggatagccatcgccagagccctggtcagacagcctaaagtactgctgctggat
gaagccacttctgccctggacactgagagtgagaagattgtccagcaggccttagacgcc
gcccggcagggccgcacctgcatcgtgatcgcccaccgcctgtctaccatccagaacgca
gaccaaatagcggtcattcagtatggtcaggtgacagaacagggtacacatgctgaccta
atggctaaagagggggcttactatgccctggtcaacgcacaggtcacccactaa
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