Coregonus clupeaformis (lake whitefish): 121555763
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Entry
121555763 CDS
T08357
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121555763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121555763
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121555763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121555763
NCBI-ProteinID:
XP_041725527
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MSGDHPNDKEAMSIYSITLNGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAVQAGVGVGDW
VVSIGETNAEDMTHVEAQNKIRAAEQSLTLTLSKAFHAGGDQKDSLAPAYVQPKYSFAPS
TAINKMARPFTPGGGNTVIKPVAYAPKVNTPASTARASMLQPHNGVKASVSPAKAQTQAA
DKPDASRTPAPVSSGPKVRPPWVTDPGFADRYAPDKTSTVLTQHRQPAQPTPMQNRSSIL
QAAQQAPEDSGRTPLCGACNKIIRGRYLVALGQSWHPEEFRCSQCKVVLDEGGFFEERGS
VFCAKCYDNRYAPNCAKCKKVIIGEIMHALKMTYHVQCFMCAACKSPIRNQAFYMEEGEP
YCERDYEKMFGTKCHGCDFKIDAGDRFLEALGFSWHDTCFVCALCQINLEGKTFYSKKDK
PLCKDHAFAPV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgatcatcctaatgacaaggaggccatgagtatatacagtataaccctcaac
ggcccagcaccatggggcttcagacttcagggggggaaggacttcagcatgcccctcact
gtgtccaggctgacccccgggggtaaggccgtgcaggccggtgtgggcgtaggagattgg
gtggtgtccattggggagaccaacgcagaagacatgacccatgtggaggcacagaacaag
atcagagcagcagagcagtcgctcaccctcaccctcagcaaagctttccatgcgggtggc
gatcagaaggattcgctcgcccccgcctacgttcagcccaaatactcctttgcccccagc
accgctatcaacaagatggcgcggccattcacgccgggcggcggtaacacggtcattaaa
ccggtggcgtacgcccctaaagtaaacaccccggcctcaacggcccgcgccagcatgcta
cagccacacaacggcgtcaaggcctctgtgtcacctgccaaggcccagacccaggcggcg
gacaaacctgatgcctctaggacgccagctccagtcagctctggtcctaaggtgcgtcct
ccgtgggtgaccgacccaggtttcgctgaccgctacgccccagataagaccagtacggtt
ctgacccagcacagacagccggcacagcctacgcccatgcagaaccgctcctctatccta
caggcagctcagcaggcacccgaggacagtggaaggacccctctctgtggagcctgcaac
aagatcattaggggccggtacctggtggcgctgggtcagtcctggcacccagaagagttc
cggtgttcccagtgtaaagtggtgttggatgagggaggattctttgaggagcggggctca
gtcttctgcgccaagtgttatgataaccgctacgctcccaactgtgccaaatgcaaaaag
gtcatcataggggagatcatgcatgctctgaagatgacctaccatgtccagtgtttcatg
tgcgctgcctgtaagagccccatccggaaccaggccttctatatggaggagggagaacct
tactgtgagagagattatgagaagatgtttggcactaagtgccatggctgtgactttaag
attgatgctggggaccgcttcctagaggccttgggattcagttggcacgacacctgcttc
gtctgcgctctgtgccagatcaacctcgaagggaagacgttctactctaagaaggataag
cctctgtgtaaagaccatgcctttgctcccgtctga
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