Coregonus clupeaformis (lake whitefish): 121555810
Help
Entry
121555810 CDS
T08357
Name
(RefSeq) thyroid hormone receptor-associated protein 3-like isoform X1
KO
K13112
thyroid hormone receptor-associated protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121555810
Spliceosome [BR:
cclu03041
]
Complex B
Other components
Complex B specific factors
121555810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THRAP3_BCLAF1
Btz
Motif
Other DBs
NCBI-GeneID:
121555810
NCBI-ProteinID:
XP_041725595
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MAHVTLFPLVLSIRDAECLALNVSVQCCSVNYFLCSLFIPMKKHTGSRSRTRSRSRSHSP
SHNNRERNYPREYQNNNREFRGYHRGFRRPYYFRGRGRGYFPRGRFQRGGGGGYNNNYRP
NNWQNYRQHPQQQQQQQQQQHPHPHSPRRGRSRTPKKRSGSPRSHSHSKYSDRSSSPRSR
RSRHSSSSHSSSPTRRSGSGSATQNSKDVKEERSASKEVQKRGGGGGGGGGGDGEPVEIT
GGSAGPDGGAGGDKPKANWQGMTDHSNSTSPKRSSPQVRSAVIIGQGAPATTQASPSPNS
TNANGPDSNGAPSWQTQTVGSSPSTKSPSQKSPTPVFSGFGVFSKEDNLAGDKAAMFKRF
LEVHNHKKKQSGWENGREMETNGGDVEREKGNGMKSSGGIFDRELDKGEKEKYKYREDFD
DEGNVSLNSFLKATPFFSCDGEEEDEEMILKPRPKVLRKDRDREDDDSPKLKSKVTLSAR
KLFEERFGKWEDLAYLQVAAKDDDLDAMAEEIYRSRKQEKAAAIAAALAKREAIAGMLRG
FSPDNVSKGRRKEKAASSPSPTPPPRRNSDREMFMVKGEDSPPRASGKRGAEFSVRMDSL
RDDVARSSGVMVGERRLSRELVHPTKKEQGFHSIFQHIQATELQRSPLELFSQHIVTIVH
YIKAQHFPSNGITLNERFAMYQRRAAEKEMMKPRKSPEIHRRIDVSPSAFKKHSHLFEGM
KNSGDGSYKDEGKNIKGDSMDLRLDIERRKKYSTRERDYKQDGGRDSGDSPEASRERSAE
KSSKHHKKSKGFGPSTSSSRKNKKKRSRSRSSSSSSSAESHRGGDYPHEGFNKARLGPRG
DYGGPMERGRGRGGFQFRIRGRGWNRGNYQGNNTTNGNPPNMDIPVHPKNEDWDPEYTPK
SRKYYLHDDREGERKWVDNRGRGGRGNFLRGSRGRFIIRKATVGPPNNNNNNSSSPKWTH
DKFQVNGGEEEGEPQEEDTEQDHKDQEKSEDTVQ
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgtgaccctctttccactagtgctcagcataagagatgcagagtgtcttgct
ctcaatgtgagtgtgcaatgctgctcggtgaactactttctctgttcactctttattcca
atgaaaaaacacactggctctaggtcccgcactcgctcgcgctccagatctcattctcca
tcccacaataatcgagagcggaactacccaagggagtaccagaataataaccgcgagttc
cggggctaccaccgaggcttccggaggccctactactttagaggccgagggcgtggctac
ttcccacgggggcgcttccagaggggtgggggaggcggctacaataacaactaccgtccc
aataactggcagaactacaggcagcacccccaacagcagcagcaacaacagcagcagcaa
cacccccacccccacagcccgagacggggacgatcccgtacccctaaaaagcgctctggt
agccctcgttcccacagccactccaagtactcggaccgctcttcctcgccccgatcccgg
cgctcccgccactcctcttcctcgcattcttcctctcccacacgcaggtcaggctccggg
tcggccacgcagaactctaaggatgtcaaggaggagcgttctgcctccaaggaggtccag
aagagaggaggaggaggaggaggaggaggaggaggagatggcgagcccgtggagatcaca
ggagggtctgcagggcctgatgggggcgccggtggggacaagcccaaggctaactggcag
ggcatgacggatcacagcaatagcaccagccccaagaggtcaagtcctcaggtgcgctca
gctgttatcattggtcagggcgcaccagcgacgacccaggctagtccctctcctaacagc
actaatgctaatggccccgattccaatggtgccccctcatggcagacacagacggtgggc
agctcgccttccaccaaaagcccttctcagaaaagccccacacctgtgttctctggcttt
ggcgtcttctctaaagaggacaacctggcaggcgataaagcagctatgttcaaaaggttc
ttggaagtgcacaatcataagaaaaagcagtccgggtgggagaatggcagagagatggaa
accaatggtggggatgtggagcgggagaaagggaatggcatgaagtcctctgggggcatc
tttgacagagagctcgacaaaggggagaaggagaagtacaagtacagggaagactttgac
gatgagggaaatgtgtcgttgaacagcttcttgaaagccacccctttcttttcctgcgat
ggtgaggaagaggacgaggagatgatactcaagccccgtcccaaggtgctccgcaaagac
cgtgaccgggaggacgacgattcgcccaagctcaagagcaaagtcaccctctcggcccgc
aagctattcgaggagcgcttcggcaagtgggaagacctggcctacttgcaggtggctgcc
aaagatgacgatcttgacgccatggcagaggagatttaccgcagccggaagcaggagaag
gcggcggccatagctgcagcactggccaagagagaggccatagcgggcatgctcagaggc
ttctccccggacaacgtcagcaaaggcaggaggaaggagaaagctgcctccagcccgtcc
cccacacccccaccacggaggaactctgaccgagagatgttcatggtcaagggggaggac
tctcccccaagggcctctgggaaaagaggagcggagttcagtgtcagaatggattccctc
agagatgacgtagcaagatcctctggtgttatggttggtgagcgaaggttatcacgggaa
cttgtgcatcctactaaaaaggagcaggggtttcactctatcttccagcacattcaggcc
acagagttacaaaggagtcccttagagctgttttcacagcacattgtcaccatcgtccac
tacataaaagcacagcactttccatccaacggaattactctaaatgagcgatttgccatg
taccaaagaagagctgcggaaaaggaaatgatgaagccaagaaagagcccagagatacac
aggagaattgatgtttctcccagtgcttttaagaaacactctcacctgtttgagggaatg
aaaaactccggggatggcagttacaaggacgaaggtaaaaacattaagggtgactcaatg
gaccttcgtctggatattgagcgccgtaaaaaatattccacccgggagagagattataaa
caggatggggggagagattcaggagactccccagaagctagcagggagaggtccgctgag
aaatcctccaagcaccacaagaagtccaagggttttggtccctcaacctcttcctccagg
aaaaacaagaagaagcgatctcgctctcgctcctcctcttcctcttcatctgccgaatct
cacaggggaggagactacccccacgaaggctttaacaaggccaggctggggcctcggggg
gactatggtggccccatggagaggggacgaggacgcggaggttttcaatttagaataaga
ggaaggggctggaacaggggaaattaccagggaaacaataccaccaatggtaatccccct
aacatggacataccagttcaccccaagaatgaggactgggacccagagtacacacccaag
agccgaaaatactacttgcatgatgacagggagggcgagaggaagtgggtggacaaccga
ggacgtggaggacggggaaacttcctgcgtggcagcaggggccgtttcattatccggaag
gccaccgttggcccacccaacaacaacaacaacaacagcagcagcccaaagtggacacat
gacaagtttcaggtcaacgggggggaggaggagggcgagccccaggaggaggatacagag
caggaccacaaagaccaggagaagtctgaagacactgtccaataa
DBGET
integrated database retrieval system
