Coregonus clupeaformis (lake whitefish): 121555875
Help
Entry
121555875 CDS
T08357
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4 isoform X2
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04137
Mitophagy - animal
cclu04141
Protein processing in endoplasmic reticulum
cclu04210
Apoptosis
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121555875 (atf4a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121555875 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121555875 (atf4a)
09143 Cell growth and death
04210 Apoptosis
121555875 (atf4a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121555875 (atf4a)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121555875 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121555875 (atf4a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
121555875 (atf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
ZapB
DUF3088
UPF0242
Laminin_II
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
121555875
NCBI-ProteinID:
XP_041725665
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MSLLSSQLALEDVGAQLLDNWFLTADPMGPRLDQDEEDDLPPSLSFSSSSSLSPSFSLSP
SPSHLSFSPPPPSFLVSSKAGSGVEDQLMPLTPWLEASELLDAHMGTNGCRDDAFSGMDW
MAEKIDLSDFDLDSLIGSCCSDAPPSSPEELLASLETHMDLDLVHPFTVPIPAPREELLA
SLGSPLADLPPLVLPSLELPEEEVKDEVRGPVVTVQDQEVVVKSEPQSPAPLSPAPLSMG
YTLELGSEVDVDVLEVETTDTPTTIIPEPSYRLQTTAPVVLSGHFVVVLSPKEEPTILPT
STLSSSASSSCDDQSDDSDSGIDSVSGSPPRHPSSSPSPSPSIAGSSRTKPYSKPDPKTT
SPTTLSGKVKSVSGAPKVVEKKLKKMEQNKTAATRYRQKKKGEQEVLSAECSELEQRNRE
LAEKAEGISREIQYLRDLMEEVRSAKNRKKTAVSVA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgttgagttcccaactggccttggaggacgttggggcccagttactggacaac
tggtttctgacggctgaccccatggggccccgtctggaccaagatgaagaggatgatcta
cccccctctctctccttctcttcttccagctccctctctccctcctttagtttgtctcct
tccccctcccatctctcgttctccccccctcctccctcgttcctggtgagcagcaaggcc
gggtccggggtagaggatcaactgatgccgttgactccatggctggaagctagcgagctg
ctcgatgcccacatgggaacaaacggctgcagagatgatgcgttttcgggcatggactgg
atggctgagaagatagacctgagtgatttcgacctggactctctgattggctcctgttgt
tccgatgccccgcccagttcccccgaggagctcctggcctccctggagacccacatggac
ctagacctggtacaccctttcactgtcccaatccctgccccacgcgaggagctcctggcc
tccctgggcagccctctggccgacctaccccctttggttctcccctccctggagctccct
gaagaagaggtaaaggatgaggtcagaggtccagtggtgacggttcaggatcaagaggtt
gtggtgaagtctgagccacagtccccagcacccctttctccggctcccctctccatgggg
tataccctcgagctggggagcgaagtggacgttgatgtcttggaagtcgagaccaccgac
actccaaccaccatcatcccggagcccagctaccgcctccagaccaccgcccctgttgtc
ctctccggccacttcgtggtggtcctctcccctaaagaggagccaaccatcctccccaca
tcaaccctctcttcctcagcctccagtagctgtgatgaccagtctgatgacagcgattct
ggcatcgactctgtatctggctcccctcctcgccacccatcttcatccccctctccttct
ccctccatagccgggtcctccaggaccaaaccctactccaaacccgaccccaagactaca
tcccccacaaccctcagtggcaaggtcaaatcagtatccggggcacccaaggtcgtggag
aagaaactcaagaagatggagcagaacaagacggcggcgacacgctaccgacagaagaag
aagggcgaacaggaagtgctgagtgcagagtgttccgagctggagcagaggaaccgtgag
ctggcagagaaggctgaaggcatcagcagagagatccagtacctcagagatctgatggag
gaggtccgctcagccaagaacaggaagaagaccgctgttagtgtggcgtag
DBGET
integrated database retrieval system
