Coregonus clupeaformis (lake whitefish): 121555906
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Entry
121555906 CDS
T08357
Name
(RefSeq) nck-associated protein 1-like isoform X1
KO
K05750
NCK-associated protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121555906
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121555906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
121555906
NCBI-ProteinID:
XP_045069573
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MSRGVMQPSQQKLAEKFTILNDRGIGMLTRIYNIKKQGQVWKACGDPKAKPSYLVDKNLE
SAVKFIVRKFPAIETRNNNQQLTQLQKEKSEILKNLALYYFTFVDVMEFKDHVSELLNTI
DACQVFFDVTVNFDLTKNYLDLVVTYTTLMMLLSRIEERKAIIGLYNYAHEMTHGASDRE
YPRLGQMIVDYENPLKKMMEEFVPHGKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS
APSTMLNPAQSDTMPCEYLSLDCMEKWIVFGFVLCHAVLNTDPAALSLWKLALQSSTCLC
LFRDEVFHIHKACEDLFVNIRGISPKSSVPSYNKRLNDIKECKEQALSHAGSMHRERRKF
LRSALKELATVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSTDDFIDKHI
AELIFYMEELRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVN
TMTSLSVKQVEDGDVFDFRGMRLDWFRLQAYTSVSKTSLGIADHRELGKMMNTIIFHTKM
VDSLVEMLVETSDISIFCFYSRAFEKMFQQCLELPSQSRHSISFPLLCTHFMSCTHELCP
EERHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKS
KKQTGKKGEPEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPR
EYLTSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRSYMTVLQSIENYVQIDITRVF
NNVLLQQTQHLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELIF
NAEEYSDISEMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVDNVEVLNQMRTSFD
KPEQMAALFKKLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSVEDFKDH
IPRETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAV
SMPTLASNVMSQYSPAIEGHCNNIHCLAKAVNQIAAALFTIHKGSIEDRLKEFLALASSS
LLKIGQETDKMTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSIS
SSA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggggggtaatgcagccgagccagcaaaagctggcagagaaattcaccatcctt
aacgacaggggaatcgggatgctcacccggatctataacatcaaaaagcaaggacaagtt
tggaaggcatgcggggaccccaaagcaaagccgtcatacctggtagacaaaaacttggag
tcggcggttaagtttatcgtacggaaattcccagcaatagagacacgaaacaataatcaa
cagcttacacagcttcaaaaagaaaagtctgaaatactaaagaatctagctctatattac
ttcacatttgtggatgtcatggaattcaaggaccatgtttctgaattgctgaacactatt
gacgcttgccaggttttctttgatgttacggttaactttgacctcaccaagaactacctt
gacttagttgtcacctacactacactaatgatgttactgtcccgtattgaagagcggaaa
gcaatcattggactctacaactacgcccatgaaatgacacacggggccagtgacagggaa
tacccaaggctgggccaaatgatcgtggactatgagaatcctctgaaaaagatgatggaa
gagtttgtccctcatgggaagtctttgtcagacgcactcatctcgctgcagatggtctac
cccaggaggaacctgtccgcagaccagtggaggaacgcccagcttctgagcctgattagc
gcccccagtaccatgctcaacccagcccagtcagacacaatgccctgtgaatacctctcc
ttagactgtatggagaaatggattgtgttcgggttcgtcctgtgccacgcggtgctgaat
actgacccagcagcgctgagcctgtggaagctggccctccagagcagcacctgcctctgt
ctcttcagggatgaggtcttccacatccacaaggcctgtgaggacctgttcgtcaacatc
cgtggtatcagtccaaagtcatctgtaccaagctacaataaacgtctaaatgacatcaaa
gaatgcaaagaacaagcactgtcgcacgctggatccatgcatagagaaaggcgcaagttt
cttaggtctgccctgaaagagttggccacagttctgtctgaccagcctggactgctgggc
ccaaaggctctgtttgtgttcatggctctctctttcgcccgggacgagatcatctggctc
ctccgccacgcagacaatatacagaaaaaaagcacagatgacttcattgacaagcacatt
gcagagctcatcttctacatggaggagctcagggcacacgtcaggaagtatggtcccgta
atgcaacggtactatgtgcagtacctctccggctttgacgctgtggttctcaacgagctt
gtgcagaacctctccgtctgccctgaggacgaatccatcatcatgtcctcctttgtgaac
accatgacctccctcagcgtgaagcaagtggaggacggagacgtgtttgatttccggggc
atgaggcttgactggttccgtctgcaggcctacaccagtgtgtccaaaacctctctgggc
atcgctgaccaccgggagctgggcaagatgatgaacaccatcatattccacaccaagatg
gtggactccctggtggagatgctggtggaaacctcggacatctccatcttctgcttctac
agccgagcatttgagaagatgtttcagcagtgtttggagctgccctcacagtcgcgccac
tctatctcgttccccctgctgtgcacacacttcatgagctgcacccacgagctctgtccc
gaagagcggcatcacattggcgaccgcagtctgtcgctctgcaacatgttcctggacgag
atggccaagcaggcgcgcaacctcatcaccgacatctgcaccgagcagtgcacgctcagt
gaccagctgctccctaaacactgtgcgaaaaccatcagtcaggcagtgaacaagaagtct
aaaaagcagactgggaagaaaggtgagccggagcgagagaagccgggtgttgagagcatg
aggaagaacaggctcctggtcaccaacctggacaagctgcacacggcgctgtcggagctg
tgcttctccatcaactacgtgcccaacatggtggtgtgggagcacacctttaccccccgc
gagtacctcacctcccacctggagatccgcttcaccaagtccattgtggggatgaccatg
tacaaccaggccacgcaggagatcgccaagccctccgagctgctcaccagcgtgcgttcc
tacatgacggtgctgcagtccatcgagaactatgtgcagatcgacatcacgcgggtgttc
aacaacgtgctgctgcagcagacccagcacctggacagccacggggagcccaccatcacc
agcctctacaccaactggtatctggagaccttgctccggcaggtaagcaatggccacatt
gcctacttccctgccatgaaggcctttgtcaacctgcccacggagaacgagctcatcttt
aacgctgaggagtattcggatatatccgagatgaggtcactgtcggagctgctgggaccc
tatggcatgaagttcctcagcgagagcctcatgtggcacatatcctcccaggtggcagaa
ctcaagaaactggtggtggacaacgtggaagttcttaaccagatgaggaccagctttgat
aagccagagcagatggctgccctctttaagaagctctcatctgttgacagcgtcctgaaa
aggatgaccattattggagtcatcttgtcattccgatcactggcccaggaagcactccgc
gatgtgctgtcctgccacattcctttcctggtgagctccgtcgaggatttcaaggaccac
attcccagagagacagacatgaaggtggccatgaacgtgtatgagctgtcgtctgcagca
ggcctgccctgtgagatagacccagccttagtggtggccctttcctcacagaaatcagaa
aacatcagcccggaggaggagtataagatcgcctgtctgctcatggtcttcgttgccgtt
tccatgccaactctggccagcaacgtcatgtctcaatatagccctgcaatcgaagggcac
tgcaacaacattcactgtctggcgaaagctgtcaaccagatagctgctgccttgttcacc
attcacaagggaagcattgaagatcgtctcaaagaatttctggctctggcatcttccagc
ttgctgaagatcggccaggagaccgacaaaatgacgacacgaaacagggagtctgtgtac
ctgctgctggacatgattgtccaagaatctccattcctcaccatggacctcctggagtcc
tgcttcccctacgtgctactgagaaacgcttaccacgccgtctacaagcagagcatcagc
tcctctgcataa
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