Coregonus clupeaformis (lake whitefish): 121556093
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Entry
121556093 CDS
T08357
Name
(RefSeq) neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121556093
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121556093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121556093
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121556093
04090 CD molecules [BR:
cclu04090
]
121556093
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121556093
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121556093
04091 Lectins [BR:
cclu04091
]
121556093
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121556093
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
NCAM1/2
121556093
CD molecules [BR:
cclu04090
]
Proteins
121556093
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
121556093
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121556093
Lectins [BR:
cclu04091
]
I-type lectins (Siglecs)
121556093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_5
Ig_6
Ig_4
C1-set
V-set_CD47
BARF1_ig2
Motif
Other DBs
NCBI-GeneID:
121556093
NCBI-ProteinID:
XP_045081917
LinkDB
All DBs
Position
17:complement(26736851..26745379)
Genome browser
AA seq
412 aa
AA seq
DB search
MAESMLILRMCSIMMVLGFSESKMEIITHTADVLLGENSMLLCKAGGEGEITWQKDGEDA
EDEQVEKVDETSSKLFIRNAKMEDTGRYTCLCEFETGHRDDVSLTIFVYERPSFGQTPVY
HEFLEGQDAVITCLVTGKPGVEVNWERDHQKLHSDGRITILKDNSLQIKNINRKDHGSYT
CEGKIKDRHISEKLVITIFVNVPPTVKIHEEVKNVMAGPETNVSLSCLVEGVPQPNITWT
TPDSSDESRYKYNSDKSELIISSVVRSDYGEYICTAKNKIAESSAMIMLDVSEHPVAMLS
QEKMEVEPGQTLSVSCNVSGHPMPALQWVRKTNNDHLVKVDAGGGRVRMEDGYVLVIDNV
TPSDGGLYSCMAISPVGNTSTDFSLQTWPGKASQVSGTPGPTSVHFTLGGFP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcgatgctcatcttgagaatgtgttccataatgatggtccttggtttttca
gagtccaaaatggaaatcatcacccacacagcagatgtgttgctgggtgagaattccatg
ctcctctgcaaagctggtggggaaggagagatcacctggcagaaagatggagaggatgct
gaagatgaacaggttgagaaagtggatgagacatcgtcaaaactgttcatcaggaatgcc
aagatggaggatacaggacggtacacatgcctctgtgaatttgagacaggtcacagagat
gatgtatccttgaccatctttgtctacgagcggccatctttcgggcaaacaccggtctac
catgagttcctggagggtcaagatgcggttatcacctgcttggtcactggcaagccgggg
gtggaagtcaactgggagagggaccatcagaaactgcactctgacggtcggatcacaata
ctgaaagacaactctctacagatcaagaacatcaacaggaaggatcatggatcctatacc
tgtgagggcaaaatcaaggaccggcacatttccgaaaagctcgtcatcaccatttttgtc
aacgttcctcccacagtgaagatccatgaggaggtgaagaatgtcatggccggaccagag
accaatgtctccctcagctgcctggtcgagggagtcccccaaccgaacatcacctggaca
accccagactcttcagatgagtcccgctacaagtacaactcagacaagagtgagctgatt
atctcgtccgtagtcaggagtgactatggagagtacatctgcacggccaagaataagatc
gcagagagcagtgccatgatcatgctggatgtctcagagcatccagtagcaatgctgagc
caggagaagatggaggtggagcctggccagacactctcagtgtcctgtaatgtctcagga
caccctatgcccgcgctgcagtgggtcaggaagaccaacaatgaccacctcgtaaaagta
gacgctggtggaggtcgagtgagaatggaggatggctatgtcctggtcattgacaatgtg
acaccctctgatggaggtctatacagctgcatggctatcagtcctgttggcaacacctcc
acagacttcagcctgcagacctggccaggtaaagcatcccaggtgagtggcaccccaggg
cccacgtcggtccacttcaccctggggggcttcccc
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