KEGG   Coregonus clupeaformis (lake whitefish): 121556105
Entry
121556105         CDS       T08357                                 
Symbol
si:ch211-274f20.2
Name
(RefSeq) calnexin isoform X1
  KO
K08054  calnexin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141  Protein processing in endoplasmic reticulum
cclu04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121556105 (si:ch211-274f20.2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121556105 (si:ch211-274f20.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:cclu03110]
    121556105 (si:ch211-274f20.2)
   04131 Membrane trafficking [BR:cclu04131]
    121556105 (si:ch211-274f20.2)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:cclu04091]
    121556105 (si:ch211-274f20.2)
Chaperones and folding catalysts [BR:cclu03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   121556105 (si:ch211-274f20.2)
Membrane trafficking [BR:cclu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    121556105 (si:ch211-274f20.2)
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    121556105 (si:ch211-274f20.2)
Lectins [BR:cclu04091]
 L-type lectins
  121556105 (si:ch211-274f20.2)
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 121556105
NCBI-ProteinID: XP_041725924
LinkDB
Position
Unknown
AA seq 416 aa
MMLGRLLLACVCLTPAGPVQAIYRCVQVPEEAHFAETFDSGPLDRRWVLSKAVKETNAEA
LKYDGQWVLEEPEAAMYPGNRALVMKSSGQHHAIAAYLHRPFTFMHTPLCLQYEVKFGRD
VECSGAYIKLLTQTHQLRLSQFSESTPYSVMFGPDKCGTSHRLHLIVRVTDSSNGRNQEI
HAPQPADDLTVYFTDRQPHLYTLQLYLDSRYEIFIDQSLISQGRLLTDEVQYTESSDSQP
ESPVSGLGAGSVGALGLELWSLSGEVMFDNFLLTDDLELAERWTQDTWGRKQPGLLERLL
IATNSRPWLWGVYVFTVGLPIILFISYMWPDKRFGPPDQDYYYKKSDEPQPDRQPERDQP
DRPTSLSDYGAVGRVGARRRETQKAQRKSDLEVEVVMETLPGTKTKVILDTHPSLH
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgatgctgggccgtctgctgcttgcctgtgtgtgtttaaccccggctggtccagttcag
gctatctacagatgtgttcaggttccagaagaagcacattttgcagagacattcgactca
ggtcctctagacaggagatgggtcctgtccaaggctgtgaaagagacaaatgctgaggct
ctcaaatacgatggccagtgggtgttggaggagccagaggctgcaatgtatcctgggaac
agagcactggtgatgaagtcatcaggacaacaccacgccatcgctgcttaccttcacaga
cccttcaccttcatgcacacaccgctctgcctgcagtatgaggtgaagttcgggagagat
gtagagtgcagtggagcctacatcaaactgctgactcagacccatcagctacgactgagc
cagttcagtgagtccactccgtactcggtgatgtttggtcctgataagtgcggcaccagc
caccgcctccatctcatcgtcagggtaacggactctagcaacggccgtaaccaggagata
cacgccccccaacccgccgatgacctgacagtgtacttcaccgaccgacaaccacacctc
tacacactacaattgtatctagacagcaggtatgagattttcattgaccaatcgctgatc
agtcaaggccgcctgctgacagacgaggtccagtacacagaatcctctgacagccaacca
gagtccccggtgtctgggttaggggcggggtcagtcggggcgctgggtctggaactgtgg
tcattgtcgggggaagtgatgtttgacaacttcctgttgactgatgacctggagctggct
gagagatggacacaggacacatggggccggaaacaacccggcctgttggagcgactcctg
atagcgactaactctcgtccctggctctggggggtctacgtcttcaccgtgggattaccc
atcatcctcttcatcagctacatgtggccggacaagaggttcggcccccctgaccaggac
tactactataagaagtctgatgaacctcagccagacagacaaccagagagagaccagcca
gacagaccaaccagcctctcagactatggtgcggtgggcagagtgggcgccaggaggaga
gagactcagaaggctcagaggaagtcagacctggaggttgaggttgtcatggagacactg
cctgggacaaaaactaaagtgatcttggacacacatccttcccttcactag

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