Coregonus clupeaformis (lake whitefish): 121556121
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Entry
121556121 CDS
T08357
Name
(RefSeq) cyclic nucleotide-gated cation channel
KO
K04949
cyclic nucleotide gated channel alpha 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121556121
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121556121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Tropomyosin
Trimer_CC
KxDL
HAUS-augmin3
ZapB
XhlA
Med9
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
121556121
NCBI-ProteinID:
XP_041725944
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MTGQVLGEGTELASQRLSVKTWLDEECERADSNLSHLSRGQSMCDDTSSELQRMAVIDRR
GLTSQNSFRGRGAMSRLVSMVVTLREWAHKSLVEEQERPDSFLERFRGPELQAPPSRISQ
SRPDAEPMDRNDHIHTKSPGMLIVSPADDMYYHWLLIISTAVLYNWCLLVARACFDELQT
SGAIVWLVLDYLCDGLYILDTAVRLRTGFLEQGLLVKDLSKLRDSYLKTVQFKLDLLSIL
PTDLFYLSLGIHTPLLRFNRLLRFNRMFEFFDRTETRTSYPNAFRITNLVLYILVIIHWN
ACIYYSFSKALGLGSDSWVYPNQTTLSRGYIYCLYWSTLTLTTIGETPPPVRDEEFLFVV
FDFLVGVLIFASIVGNVGAMISNMNATRAEFQSRIDQVKHYMQFRHVSRDLEHRVIRWFD
YLWTNQKAVDEQEVLKSLPNKLRAEIAINVHLETLKKVRIFQDCEAGLLVELVLKLRPQV
FSPGDYICRKGDIGKEMYIIKDGRLAVVGDDGATQLAMLTSGSCFGEISILNIRGSKMGN
RRTANIRSLGYSDLFCLSKRDLTEALSDFPHARTQLEQRGRDILRKEGLLDEEGGVSLGV
EEMEEKVEKLEACVDHLQTRLARLQMEYATAQQRLKQRITVLERSVGTAVTVGSGFLSDA
DGNESGGDDGARSEINIRL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacggggcaggtgctgggtgagggtactgagctggcgtctcagaggctgtcagtgaag
acatggctggacgaggaatgtgagagagcagacagcaacctgagtcatctgagtcgaggc
cagtctatgtgcgatgacacgtcttcagaactacaacggatggctgtcattgaccggaga
ggactcacctcccagaactccttcagggggagaggagccatgtccaggctggtcagcatg
gtggtgactttgagagagtgggctcataagagtttggttgaggagcaggagagacctgat
tcgttcctggagaggttccgaggccctgagctgcaggctccgcccagcaggatcagccaa
tcacgacctgacgctgagcccatggaccgcaatgaccacatacacactaagagtccaggt
atgttgatagtatctccagctgatgatatgtattaccactggctcctcatcatctccacc
gctgtgctctacaactggtgtctcctggtggccagggcgtgttttgatgagcttcagacc
agtggtgccatcgtgtggctggtgttggactatctgtgtgacggtctctacatcctggac
acggccgtcaggctacgcacaggattcctggagcagggtctgttggtgaaggacctgtcc
aagctgagagacagttatctgaagacggttcagtttaaactagacctgctgtctatcctg
cctactgacctgttctacctgtctctgggaatacacactccccttctccgcttcaacaga
ctgctgcggttcaaccgcatgtttgagttcttcgaccgtacagagactaggaccagctac
cccaacgccttccgcatcactaacctggtcctttacatactggtgatcatccactggaac
gcctgcatatactactccttctccaaggccctggggctggggtctgattcctgggtgtac
cccaaccagaccactctgtcccggggttacatctactgcctctactggtccaccctcacc
ctcaccaccataggagagacaccaccacccgtacgagatgaggagttcctcttcgtggtc
tttgacttcctggtgggagtgttgatcttcgccagcatcgtggggaacgtaggagccatg
atctccaacatgaacgctacgcgggcagagttccagagccgcatcgaccaggtcaaacac
tacatgcagttcagacacgtcagccgcgacctggagcaccgtgtcattcgctggttcgac
tacctctggaccaatcagaaggcggtagacgaacaggaagtgctgaagagcctgcccaat
aagctgagggctgagatcgctatcaatgtgcacctggagactttgaagaaggtgcgtatc
ttccaggattgtgaggcaggcctgctagtagagttggtattgaagctacgtccccaggtc
ttctctccaggagattatatctgtcgtaaaggagacatcgggaaggagatgtacattatt
aaagatggccgcctggcggtggtgggagatgatggagctactcagctggccatgctcacc
tcaggaagctgcttcggggagatcagcatcctgaacatccggggcagtaagatgggcaac
aggagaacagctaacatccgtagccttggttactcggacctgttctgcctgtctaagaga
gatctgaccgaggcgctcagcgacttccctcatgctagaacccagttggagcagaggggg
cgggacatcctcaggaaggaggggctactggatgaagagggaggagttagcctgggagtg
gaggaaatggaggagaaggtggagaagttggaggcgtgtgtggatcatctccagacgcgg
ttggcacggctacaaatggagtatgccaccgcgcagcaacgcctgaagcagcgaatcacg
gttctggaacgcagcgtcggcaccgcggttaccgtcggaagcggcttcctgtctgacgcc
gacggcaacgagagtggtggtgacgacggagcacgcagtgagatcaacatcagactgtga
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