Coregonus clupeaformis (lake whitefish): 121556175
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Entry
121556175 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2 isoform X1
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121556175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121556175
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121556175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121556175
NCBI-ProteinID:
XP_041726004
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MERGLFNHLFSARTTALCGFFLFFCHEKTHSHAEDELFKKLFIGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLERIENTVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLP
LFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCLSILLTLFLLLVSDCGEKITLCISV
LLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPGTHKMP
RWVHSVFLDLIPRWLFMRRPAPDGRRRRLLLLQQGAAVAQHQGRTTTTTRPPGLDHPPCL
STSASWLRDGGGTREDPRGRTPCYEDLELGALTSYFSFRPPSPRPPGSTHPPQQNHPPQG
AGGPQNRLDGGSGRGGVNRRINPTQRLEKMDNLVSESLSPSVIRALEGLHYIADHLRAED
ADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtggattattcaaccacctgttctcagcgaggaccactgcgctctgtggtttc
ttcttatttttctgtcatgagaagacccactcgcacgcggaggatgagctgttcaagaag
ctcttcatcgggtacaacaagtggtccagacccgtgcccaacatctcagacgtcgtcatc
gtcaagtttggcctctccatagcacagctcatcgatgtggacgagaagaatcagatgatg
acgaccaacgtctggctgaagcaggagtggaatgactacaagctacgctggaggccttct
gactacgacaacgtgacgtccatcagagtcccgtcagaactaatctgggtcccagacatc
gtcctctacaataatgcggacggtgagttcgccgtgacccacatgaccaaggcccacctg
ttccacaatgggaaggtgcgctgggttcccccggccatctataagtcctcctgctctata
gacgtcaccttcttccccttcgaccagcagaactgtaagatgaagtttggctcctggact
tacgacaaggctaagattgatctggaacgcatcgagaacacggtggatctgaacaactac
tgggagagtggggagtgggccatcatcaatgcagtgggaacatacaacaccaagaagtac
gactgctgtcatgagatctaccctgatatcacatacttcttcatcatcagacggctgcct
ctcttctacaccatcaacctgatcatcccctgtctgctcatctcctgtctcaccgtcctg
gtcttctatctcccctcagactgtggggagaagatcaccctgtgtctctccatcctcctc
accctcttcctccttcttgtttcagactgtggggagaagatcaccctgtgtatctccgtc
ctcctctccctcaccgtcttcctgctcctcatcacagagatcatcccgtccacctccctg
gtcatccctctgattggagagtacctcctcttcaccatgatcttcgtcactctctccatc
gtcatcactgtgtttgtcctcaacgtccaccaccgctccccggggacccataagatgcct
cgctgggtccactctgtcttcctggacctgatccccaggtggctgttcatgaggcggccg
gcgccggacggaaggagacgcaggttgttgttgctccagcagggggcagcggtggcacaa
caccagggacggactacaaccaccacgagaccaccaggcctagaccatcctccctgcctc
agcacctcagccagctggctccgggatggaggagggaccagggaggacccccggggacgg
accccatgttatgaggacctggagctgggggcgctgacctcctacttctccttccgtcct
ccgtcacccagacccccgggctccacccatccgccccagcagaaccacccaccccaaggg
gcaggggggccccagaaccgcctggatggtggaagtggacgaggaggagtgaatagaagg
attaaccccacccagcgactggagaagatggataacttggtgtcagagtctttgtctccc
agcgtgatacgggctctggaaggactgcactacattgcagatcacctgagggcagaggac
gctgactttagtgtgaaggaagactggaagtatgttgccatggtgatcgaccgtatcttc
ctgtggatgtttattatcgtgtgtctgctggggaccatcgggctcttcctccccccctgg
ctggccggcatgatctag
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