Coregonus clupeaformis (lake whitefish): 121556180
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Entry
121556180 CDS
T08357
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121556180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121556180
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121556180
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121556180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
121556180
NCBI-ProteinID:
XP_041726014
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPNDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKFRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKESGEGKPEEEVSAAPAAKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVAIVQDKKRQNSFVAESMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVLVQADDPISFMQLTAKNETTSKEDQFQLSLLAAMGTTLKKEANDPMASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTNDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIADLNEYLHHILSSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTSA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtttgttacactttgatcaatgttccaaatgactctgaacca
ccatccgaagtcagtctcaaaaccgacttggaaaaaggagagattaaggcaaagactgag
gccctgaagaaggtaatcatcatgatactgaatggggagaagctgccaggcctactgatg
accatcatccgatttgtcctcccacttcaagaccacaccatcaaaaagcttctgctagtc
ttctgggagattgtccccaagacgacgccagatggcaagctgcttcaggagatgatcctg
gtctgtgatgcctacagaaaggacctgcagcaccccaacgagttcatccgtggatccacc
ctgcgcttcctgtgcaagctgaaggagtctgagctgctggagcccctcatgcccgccatc
cgcgcctgcctggagcaccgccacagctatgttcgccgcaatgctgtcctggccatctac
accatctacaggaactttgaaaatctcatcccagatgcccctgagttgatccatgatttc
cttgtgaatgaaaaagatgccagctgcaagagaaatgctttcatgatgctcattcacgca
gaccaggacagagctctggattacctcagcacctgtattgatcaagtgcatacatttgga
gatattctccagttggtcattgtggagctgatttacaaggtgtgccatgctaacccgtct
gagcgtgcccgcttcatccgctgtatctacaacctgttgcagtcctccagcccagccgtc
aagtatgaggcagctggcactcttgtcacgctgtccagcgcacccactgccatcaaggct
gctgcccagtgctacattgacctgatcatcaaggagagtgacaacaatgtgaagctgatc
gtcctggatcgtctgatagagctgaaagagcatcccactcatgaacgtgttctccaggac
ctggtgatggacattctgcgtgttctgagcacgcctgacctggaagtccggaagaagacc
ctgcagctggccctggacttagtctcatcccggaacgtagaggagttggtgatagttctg
aagaaagaggtgattaagaccaacaacgtgacggagcatgaggacactgataaattcagg
cagctgctggtgcgcaccctccactcctgcagtgtccgcttccctgacatggcggccaat
gtaattcctgtgctgatggagttcctgagtgacactaacgaggcagcagcggctgatgtg
ctggagtttgtgagggaggccattcagaggttcgacaacctgaggcccctcatcatcgag
aagatgctggaggtcttccacgccatcaagactgtcaagatctacagaggagcgctttgg
atcctgggagaatactgcagcactaaagaggacattcagagtgtgatgacagaagtgcgc
agatcgcttggagagatccccatagtagagaacgagatcaagaaagagtctggggagggg
aagccggaagaagaggtgagcgcagcgccagcagccaaactggtgacagagatgggcacc
tacgtcacacagagcgccctcagctcctccagaccctcaaagaaggaagaggacaggcct
cctctcaggggcttcttgatggacggagacttctatgtggcagcctcgttggccacaacc
ctgactaaagtggccctgcgatatgtcgccattgttcaagacaaaaagagacaaaattcc
tttgtggctgagtctatgctgatcatggccaccatcctccacttgggcaagtcctctctg
cccaagaagcccatcacagacgacgatgtggaccgcatctcgctgtgcctcaaggtgctg
tccgagtgctcgcccctcatgaacgacatcttcaacaaggagtgccgcaagtccctgtct
cacatgctcactgtcaggctggaggaggagaagctatctcagaagaaagagtcagagaag
cggaacgtgctggtgcaggcagacgaccccatttcctttatgcaactgacggccaagaac
gagacgacctccaaggaggaccagttccagctcagtctactggctgccatgggaaccact
cttaagaaggaggctaatgaccccatggcctccaaactcaacaaggttacccagctgact
ggtttctcagacccagtctatgcggaggcctatgtccatgtcaaccagtatgacattgtg
ctggacgtgctggtcgtcaaccaaaccaacgacacccttcagaattgcaccctggagctg
gctacattgggtgacctcaagctggttgagaagccttctcctctcactctggcacctcat
gactttgccaacatcaaggctaacgtcaaagtggcgtccacagagaatggcatcatattt
ggcaacatagtgtatgacgtatcaggagctgccagcgacaggaactgcgtggtcctcagt
gacatccacattgacatcatggactacatccagccagcctcgtgcacagacgcagagttc
agacagatgtgggccgagtttgagtgggagaataaggtgacagtgaacaccaacattgca
gacctgaacgagtacctccaccacatcctcagctccaccaacatgaagtgcctgacccca
gagaaggcactttcaggcttctgtggcttcatggctgccaacctgtacgcccgctctata
ttcggtgaagacgccctggccaacgttagcattgagaagcccatccacctgggtcctgat
gcccctgtcaacggacacatccgcatccgggccaagagccagggtatggcgttgagtctg
ggtgacaagatcaacctttcccagaaaaaaacatctgcataa
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