KEGG   Coregonus clupeaformis (lake whitefish): 121556209
Entry
121556209         CDS       T08357                                 
Name
(RefSeq) WD repeat-containing protein 88
  KO
K24757  WD repeat-containing protein 88
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121556209
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121556209
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WDR55 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_NWD2_C ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_Aladin Tricorn_2nd Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_Vps41 PQQ_2 Cytochrom_D1 WD_LRWD1 Beta-prop_Nup120_160 PROPPIN WD40_RFWD3 Beta-prop_DCAF12 Beta_helix zf-dskA_traR KNTC1_N Beta-prop_VPS8 Zn_ribbon_8 Inh
Other DBs
NCBI-GeneID: 121556209
NCBI-ProteinID: XP_045074131
LinkDB
Position
Unknown
AA seq 307 aa
SLSLSLRLVTASWDQTLNAWDLETGKIIWTAAQGGLLTSCSVSGDGKYVVSSSDLENAIC
LTSADTGERLFHIKDHHKSTITRCRFDPQSQHVASVSEDRTIKLWDLVSTQTTLSINSTH
TNVISNCCFTANGRYLCTASWDKTLQLWDVQTGTFRSHGGLTLSKGHDGSVSSCTFSEDA
SVLVSGAYDRTVAVWDMEALCKTLELKGHVDWVTDVAISADKKWVASASKDTTVRLWNIE
HSEEIPCVIETRKAQGMGYRILKCEECGKAFSICRLENSDLVTKCVFCRLKTATRSHLQP
PPLLSMN
NT seq 924 nt   +upstreamnt  +downstreamnt
tctctgtctctctcccttaggctggttacagcatcctgggaccagaccctaaatgcatgg
gacctggagactggcaagatcatttggactgcagctcagggtggtctcctgacctcatgt
agcgtctcaggggatgggaagtacgtcgtctcctcctctgacctggagaatgcaatctgc
ctgacctcagctgatacaggggagaggctcttccacatcaaagatcaccacaagtctacg
atcacgcggtgccgctttgaccctcagagtcagcacgtagccagtgtctctgaagacaga
accatcaaactgtgggacctggtctccacccaaaccaccctctccatcaacagcacccac
accaacgtcatctctaactgctgtttcactgctaacggccgctacttgtgcacggcgtca
tgggacaagacactgcagctgtgggacgtccagacgggaacgttccgttcccacggtggc
ctgacccttagcaagggacacgacggatccgtcagctcctgcaccttctccgaggacgcg
tcagtccttgtatcgggtgcatatgatagaacagtggctgtgtgggacatggaggctctc
tgcaagaccctggagttgaagggacatgtggattgggtgacagatgtggcaatcagtgct
gacaagaaatgggtggcctccgcttccaaggacaccactgtcaggttgtggaatatagaa
cactctgaagagataccttgcgttattgagaccaggaaggctcagggaatgggctatcgt
atcctcaagtgtgaggagtgtggaaaggctttctccatttgtcgactggagaactccgac
ttggtcacaaagtgtgtgttctgccggctgaagacagcaaccagatcccatcttcagcct
cctcctctgttgtctatgaattga

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