Coregonus clupeaformis (lake whitefish): 121556239
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Entry
121556239 CDS
T08357
Name
(RefSeq) homeobox protein SIX2-like isoform X1
KO
K19472
homeobox protein SIX2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121556239
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121556239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
DUF4820
HTH_3
HTH_NDX
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
121556239
NCBI-ProteinID:
XP_041726070
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNTNSHNTLTSSMNGNKTLLGSSDDDKTLSGTPDHTSSSAAMLLAS
NSGLQMHGLAPPPGPSAILVPSHDSVHHHHSLNPMSSNLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccaacttttggctttacgcaagagcaagttgcgtgcgtctgcgaggtc
ctccaacaaggtggaaacatcgaacggctcgggcgctttttgtggtctttacccgcgtgt
gagcacctccacaaaaatgaaagtgttctcaaagccaaagctgtggtcgcctttcacaga
ggaaatttcagagagctttataagatacttgagagccaccaattttcccctcacaaccac
ccgaagctgcagcagctgtggctcaaagcacattacatcgaggcggagaagctccgaggc
cgccctctcggggctgtgggaaagtaccgtgtccgcagaaagttccccctgcctcggtct
atctgggatggcgaggagacaagttactgtttcaaagagaagagccggagcgtgctcaga
gaatggtacacgcataacccctacccttccccgcgagagaagagggagctcgccgagggc
accgggttgacaaccacacaagtcagtaactggttcaaaaacagacggcaaagagaccgc
gctgcagaagctaaggaaaggtacgaggaaaacaacgaaaactccaacaccaacagccac
aacacattgacttcttccatgaatggaaataaaacacttttggggagctcagacgacgac
aaaacgctttcaggtactccggatcacacttcgtcgagcgcggctatgctcctcgcttca
aactcagggctgcagatgcacggcctcgcgcctccacctgggcctagcgccatcctcgtg
cccagccatgactctgtgcaccatcatcactctttgaaccctatgtcgtccaacctggtc
gacctcggctcttaa
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