Coregonus clupeaformis (lake whitefish): 121556269
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Entry
121556269 CDS
T08357
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121556269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121556269
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
hnRNP proteins
121556269
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
IATP
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121556269
NCBI-ProteinID:
XP_041726093
LinkDB
All DBs
Position
39:complement(3998942..4010456)
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AA seq
314 aa
AA seq
DB search
MDRSPTTTSLMAGNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFSKYGKIVGCSVHK
GFAFVQYANERNARAAVGGEDGRMIVGQVLDINLACEPKHQRLKTVKRSAGDMYSSSFDL
EYDFQRDYYDRMYPYQSRVPPPPPPPLSRAVIPSKRPRVSLSGGGGGRGGGGGGASRRTK
TNFSSSRSSQSRVSTSRTMKADDLQTIKRELTQIKHKVDYLLESLERMEKDHTKKLDMKS
SGKPELGEVSPLLHCGGKKEESLKRESQLLNDSEEEEGDLLEEEEEEVKSRGREDDDEEE
EGEDDGDSANGDDS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaccggtctcccaccaccactagcctgatggctggcaacgttaccaacaagacggac
cctcgctcactcaactcccgggtcttcatcgggaacctcaacactctcctggtcaccaag
gcagacgtggaggccatcttcagcaagtacggcaagatagtgggctgctccgtgcacaag
gggttcgctttcgtccagtacgccaacgagaggaacgcccgggctgccgtagggggcgag
gatgggaggatgatcgtaggacaggtgctggacattaacctcgcttgtgaaccgaagcat
cagagattgaagactgttaagcgctctgcaggagacatgtacagttcttcatttgatttg
gaatatgacttccagagagattactacgaccggatgtacccgtaccagtcccgcgtgcct
cctccgcctcctccccccctgtcccgggcggtgatcccctccaagcggccccgggtcagt
ttgagcggaggtggtggaggaagaggaggtggaggaggaggggccagccgacgcaccaag
accaacttctcatcctccaggagcagccagagcagggtctccacctcacgcaccatgaag
gcagatgacctgcagaccatcaagagagagctgacccagatcaaacacaaggttgactac
ctgctggagagtctagaacgcatggagaaggaccacaccaagaagttagacatgaagagt
agtgggaagcctgaactcggggaggtgtctcctctcctccactgcggaggaaagaaggag
gagagcttgaagagggagagccaactgctcaatgactcagaagaggaggagggagaccta
ctggaggaggaggaggaggaggtgaagagtcgaggaagggaagatgacgatgaggaggag
gaaggagaggatgatggcgatagcgccaacggagacgactcttaa
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