KEGG   Coregonus clupeaformis (lake whitefish): 121556528
Entry
121556528         CDS       T08357                                 
Name
(RefSeq) transcription factor SOX-10-like
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121556528
Transcription factors [BR:cclu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    121556528
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 121556528
NCBI-ProteinID: XP_045069192
LinkDB
Position
Unknown
AA seq 491 aa
MSGEEHSLSEAELSPGGSDDGHSLSPAHSGATGGRDSPLIGPSQQLTGLSGADGGGEDGG
LVPKSEVDMDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKSKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPEYKYQPR
RRKNGKLGTNGEGGEGAEGEGSHAQPHYKTLHLDVHSTGAGSPLADLHHHHHHPAGQGPP
TPPTTPKTELQSGKMAEGKREGGGGSGSSRGGGLGVGAEASGGPSSAGGKPHIDFCTMDI
GEISHDVMANIEPFDVNEFDQYLPPNGHPGVGQGGGVTPSSSATSYAYALAAASGHSAAW
LSKQQHQQASPSASDPTKAQIKSESGAGSHYAETSSSSSGTHVTYTPLSLPHYGSAFPSL
ASRAQFEYGEHQAPGPYYTHSSQAPGLYSAFSYMGPSQRPLYTTITDPSSVAQSHSPTHW
EQPVYTTLSRP
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctggagaggagcacagcctatccgaggcagagttgagtcccgggggctcagatgat
ggtcactctctgtcaccggcacactccggggccaccggcggccgggactccccgctcatc
ggtccgtcgcagcaactgacggggctttctggcgcagatggcggcggagaagatggtgga
ctagtgcccaagtcagaggtggatatggaccggttccccatcggcatccgcgaggcggtc
agccaggtgctcgatggatacgactggacgctcgtacccatgcccgtgcgagtaaacaac
gggaacaagagcaagccgcacgtgaagaggcccatgaacgccttcatggtgtgggcgcag
gccgcgcgccgtaaactggcggaccagtaccctcacctgcacaacgcggagctcagcaag
acacttggcaaactgtggaggctcctgaatgagagtgacaagaggcctttcattgaggag
gcggagcgactgaggaaacaacataagaaggactacccagagtacaagtaccagccccgc
agacgcaagaacggcaagctggggaccaatggtgagggaggggagggagcagagggggag
ggcagccacgcccagccccattacaagaccctccacctggatgtgcacagtacaggggct
gggtcccccctggccgacctccaccaccatcatcaccaccctgcaggtcagggcccgccg
acaccccccaccaccccaaagacagagctccagtctgggaagatggcggaggggaagagg
gagggtggaggtggctcagggtcctcccgtggaggaggcctgggggtaggagcagaggcc
tctggtggcccttcatcagcgggcgggaaaccccacatcgacttctgcaccatggacatc
ggcgagatcagccacgacgtgatggccaacatcgagcccttcgacgtcaacgagtttgac
caatacctgccgcctaacgggcacccgggggtcggccagggcggcggtgtcacaccaagc
tcctctgctacatcctacgcctacgccctggctgctgccagcggtcactcagccgcctgg
ctctccaagcagcagcatcaacaggcctccccctctgcctcagaccccaccaaggcccag
atcaagagtgagtctggagccgggagccactacgcagagacctcctcctcctcgtcagga
acccacgtcacctacacccccctcagcctcccccactacggatcagccttcccctcgctg
gcctccagggcccagtttgagtacggggagcaccaggcgccggggccgtactacacccac
tccagccaggccccggggctgtactcagccttctcctacatggggcccagccagaggccc
ctctacactaccatcactgacccctccagcgtggcccagtctcacagtcctacacactgg
gagcagcctgtctataccaccctgtcacggccatga

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