Coregonus clupeaformis (lake whitefish): 121556577
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Entry
121556577 CDS
T08357
Name
(RefSeq) sphingomyelin phosphodiesterase 5
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121556577
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121556577
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
121556577
NCBI-ProteinID:
XP_041726386
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MVLRESPFPNCFVEGLHAVGWGLILPCFWFLDRLIAVCMSTSLERTQRHEQECYLHPLKV
FFGFILFLALFLVTAPLAFLGFLLWAPLQAARRPFSYHQEPPSRPAPADEGERNLGFEAG
ANKATFGFATANLCLLPDGIARFNNLGHTQRRATAIGRSIVQGVNRPHIRIFVDSPSSCG
TLSPSSSLLPGPSTTSPVSYGATDPACQPPPQAPPAVKAHSDEDQADGAVPTTTTPPPKP
IDTNCVVYVPCDDTEEPSPSPAPVINTNQNSNQQGRKGHRNPPRALRTQGVAQRGQAGPD
DVPWEVSSLFPANVDILCLEEVFDKRAALKLTNTLKPLFNHILYDVGVYAWQPPGSCSSF
KFFNSGLFLASRYPVLEAQYHCFPNGRGEDALAAKGLLSAKVLVGQNQKEKKLVGYFNCT
HLHAPEGEGEIRCEQLNMITKWIQEFQATNSEPDEVVVFDVLSGDFNFDNCSPVDSLEQK
HSLFEEYRDPCRVGPGQEKPWVIGTLLEQPTLYHEDVRTPENLQRTLEREEVRKQYISSP
VALDSCPLVYPELGQPWVGRRIDYILYRESSISKHCRTEIEEFTFVTQLAGLTDHIPVGL
RLNVILDSDNAQSEE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcgggagtccccattccccaactgctttgtggagggcctccatgcagtgggc
tggggcctcatcctgccctgcttctggttcctggaccgcctcatcgccgtctgcatgtcc
accagcctggaacgcacccagcggcacgagcaggagtgttacctccaccctctcaaggtc
ttcttcggcttcatcctcttccttgccctcttcctggtcacggctcccctggccttcctg
gggttcctgctctgggctcccctccaggccgcccgcaggcccttctcctaccaccaggag
cccccgtcaaggccagcaccagccgatgagggggagaggaacctgggctttgaggcaggg
gccaacaaggccacttttggctttgccactgccaacctgtgtctgttgccggacggcatc
gcacgcttcaacaacctggggcacacgcagcgccgtgccaccgccatcggccggagcatc
gtgcagggcgtgaatcggccacacatccgcatctttgtggactcccccagcagctgtggc
accctcagcccctccagtagcctgctccctggcccctccaccaccagccctgtctcatac
ggtgctacagacccagcctgccagccaccaccccaggctcctcctgctgtgaaggcccat
tcagacgaggatcaagctgacggagcggtcccaacaacaacgacgccgccccccaagccc
attgacacaaattgtgtggtgtacgtgccctgtgacgacaccgaggagccttccccttct
cctgcccctgtcatcaacaccaaccagaactccaaccagcagggccggaagggccacagg
aaccctccgcgggctctacgcactcagggggtcgcccagcgcggccaggctgggccagac
gacgtgccctgggaggtgtcctctctcttcccggccaacgtggacatcctgtgtctggag
gaggtgtttgataagagggcagctctgaagctgaccaacaccctgaagcccctgttcaac
cacatactgtatgatgtaggggtgtacgcctggcagcctcccggcagctgctcctccttc
aagttcttcaacagcggcctgttcctggccagccgttacccagtgctggaggcccagtac
cactgtttccctaatggccggggggaggatgccctggctgctaaaggcctgctctctgcc
aaggtgctagttggccagaatcagaaagagaagaagctggttggatattttaactgcaca
cacctccatgcacctgaaggtgaaggggagatccgctgtgagcagctcaacatgatcacc
aagtggatccaggagttccaggcgaccaatagcgagcctgatgaggtggtcgtgtttgac
gtgctttctggggatttcaacttcgacaactgctcacctgttgacagtctagaacagaag
cacagtctgtttgaggagtacagagacccctgccgggtcgggcctggccaggagaagccc
tgggtcattggcactttgctggaacagcctactctgtatcatgaggatgtaaggacccca
gagaatcttcaaaggaccctggagagagaggaggtgaggaagcagtacatctcctctcct
gtggccctggacagctgtcccctggtctaccctgagttgggtcagccctgggtggggcgc
cgcatcgactacatcctctacagagagagctccatctccaagcactgccgaactgaaatc
gaggagttcacctttgtgacccagcttgctggcctgaccgaccacattccagtgggcctg
aggctcaacgtgatcctggactcagacaatgcccagtccgaagagtga
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