KEGG   Coregonus clupeaformis (lake whitefish): 121556783
Entry
121556783         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysosome-associated membrane glycoprotein 1
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272  Virion - Hepatitis viruses
cclu03273  Virion - Lassa virus and SFTS virus
cclu04140  Autophagy - animal
cclu04142  Lysosome
cclu04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    121556783
   03272 Virion - Hepatitis viruses
    121556783
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121556783
   04142 Lysosome
    121556783
   04140 Autophagy - animal
    121556783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121556783
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121556783
   04090 CD molecules [BR:cclu04090]
    121556783
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    121556783
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    121556783
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    121556783
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   121556783
CD molecules [BR:cclu04090]
 Proteins
  121556783
SSDB
Motif
Pfam: Lamp2-like_luminal Lamp2_2nd VAS1_LD DEC-1_N
Other DBs
NCBI-GeneID: 121556783
NCBI-ProteinID: XP_041726628
LinkDB
Position
Unknown
AA seq 418 aa
MTPTHPCVVGIACFAILGCVTVAQALVTLEVTEGNSTCIKAELSASFSITYDTANGTRTV
MVPLPGSAVVGGASSCGGDGRSPWLVALFGDGHTLGLSFSSNNSLYSVSNLTLQYNLSDV
TTFPEANSTDVVTVETTSVGMVARVNTTYRCISVSPVIVGGATVTFSNVKMEAYMTGDDL
SPNESVCTADQNSPTAPLHPPSTTTAAPVPVPTPGTPNQGSYSVSNSNGTVCLLARMALQ
LNISHFSALQNKTIQEVVNLLPNQTTSSGSCDPSSATLVLTQGGTTNLSFLFTLNTTSNR
YHLSGLSVVAAWSDMTAPFNTSNSSLDYLRGSLGRSYMCSSEQTLAVDQNFSLNTFQLQV
QPFGLTRGQFAQAEECQLDQDNMLIPIVVGAALAGLVLIVLIAYLIGRKRRPAGYQTI
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgactccaacacatccatgcgttgtcgggatcgcctgctttgcgattctaggttgcgtg
acagtagcccaggctctggtcactctggaggtgacagagggaaactccacctgtataaaa
gctgaactctccgcctccttctccatcacctatgacacagccaacggcacgcgtacggtg
atggtgcccctcccagggtcggcggtggtgggtggggccagctcgtgtgggggtgacggc
cgctccccctggctcgtggcgctgtttggggatggccacaccctgggcctcagcttctca
tccaataacagcctgtacagcgtatctaacctcaccctgcagtacaacctcagtgatgtc
actaccttcccagaggccaacagtaccgatgtggtaactgtggagacgacctctgtgggg
atggttgctagggtcaacaccacctacagatgtatcagcgtctcacctgtcattgtggga
ggagccaccgtcaccttctcaaacgtcaagatggaggcctacatgacaggagatgatctg
agccccaacgagagtgtgtgtactgctgaccagaactcccccacagcccccctccacccc
ccttccaccaccacagcagcccccgtccctgtccccacccccggaacccccaaccagggc
agctactccgtctccaatagcaacgggactgtctgtctgttggcccgcatggcactgcag
ctgaacatctcccacttctctgccttacagaataagactatccaggaagtagtaaacctg
ctgcccaatcagacgaccagctcaggatcatgtgacccctccagcgccaccctggtgctg
acgcagggcggaaccaccaacctcagcttcctgtttactctgaacaccacgtctaacagg
taccacctcagtggtctgtctgtggtcgcagcttggtctgacatgacagccccgttcaac
accagtaacagtagtctggactacctgcgtggctccctggggcgtagctacatgtgtagt
tcagaacagacgctggctgtagaccagaacttctccctcaacaccttccagctgcaggtc
cagcccttcggcctcaccagaggacagtttgcacaagcggaggagtgtcagttggatcag
gacaacatgttgatccccatcgtcgtgggagcagctctggccggcctggttctaatcgtt
ctcattgcttacctcatcggcaggaagaggaggcccgctggataccagaccatctga

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