Coregonus clupeaformis (lake whitefish): 121556791
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Entry
121556791 CDS
T08357
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03420
Nucleotide excision repair
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121556791
09124 Replication and repair
03420 Nucleotide excision repair
121556791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121556791
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121556791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121556791
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
121556791
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121556791
TCR (transcription coupled repair) factors
Cul4-CSA complex
121556791
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121556791
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
121556791
NCBI-ProteinID:
XP_045070461
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAEDIRQDKKANFSALTEHNNNGVTRTSGLASNKAGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDGAVQKRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETNRL
YAAEGQRLMQERDVPEYLHHVARRLDEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILVDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQFKQYTQNQSEPSQMELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSMEEIKSATGIGTASPLSVFIEEGELRRTLQSLACGKARVLNKSPRGKDIEDGD
RFNFNNDFRHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSH
NLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacatacgacaggacaagaaagcaaacttctctgctctgacggagcacaac
aacaacggagtgacgaggacttctggcctggcctccaacaaagctggcgcctccaagaaa
ttagttattaaaaatttcaaagacaggccaaagctagcagagaactacactgaggacacc
tggctgaagcttagggatgcagtaggagccatccagaacagcacctccatcaagtacaac
ctggaggaactctaccaggcagtggagaacctgtgctcctataaagtctcccccacactc
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacaccagttcaga
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgctggcaggaccac
tgcagacagacgatcatgatccggagtatctttctgttcctggaccgtacctacgtgctt
cagaactccctgcttccctccatctgggataccgggctggagctcttccggacccacatc
gtgagcgacggggcagtccagaaacgtaccgtcgacgggatccttgagcagatcgaacgt
gaacgcaacggagagaccgtggaccgcagccttctccgcagcctactgggcatgctctca
gacctgcaggtgtataaagagtcgtttgaggagcggtttctgatggagactaacagactg
tacgctgcagagggacagaggctgatgcaggaacgagacgtgccagagtacctgcatcac
gtggctcgtcggttggatgaagagaacgatcgtgtcatcagctacctcgaccaaagcact
cagaagccacttatctctaatgtagagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctggtagatggtaaccgtgtgatggagctggctctgctc
taccagcttttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccagagaaggataaggacatggtt
caagacctattggactttaaggataagatggacaacgtggcccagggctgtttcaacagg
aacgagagcttcatcaacgctatgaaggaggccttcgaagccttcatcaacaacagaccc
aacaaacctgctgagctcatcgcaaagtacgtggactgtaaattgcgggcgggcaacaag
gaggctacagaggaggagctggagagaattctagacaagatcatgatcatcttccgcttc
atccatgggaaggatgtgtttgaggccttttataagaaggacctagccaaacgcctgctg
gtggggaagagtgcctcggtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgtcatgatccagtttaaacagtacacccagaaccagagtgagcccagccagatggag
ctgacggtcaacatcctcaccatgggctactggccctcatacactcctatggaggtccac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccacgctgttctgaagactgagttt
aaagagggtaagaaggagctgcaagtgtctctgttccagacgttggtactactgatgttc
aacgagggggaggagttcagcatggaggagatcaaatcagccactggcataggtacagct
tctcctctgtctgtcttcatagaggagggtgagttgaggcgtaccctgcagtctctggcc
tgtgggaaggcgcgcgtcctcaataagagtccccgggggaaggacatagaggacggagac
cgcttcaacttcaacaacgacttcagacacaaactgttccgcatcaagatcaaccagatt
cagatgaaggaaacggttgaggagcaggtgagcaccactgagcgtgtgttccaggacaga
cagtaccagatagacgcggccgtggtccgcatcatgaagatgaggaaaaccctgagccac
aacctgctggtgtcagaactgtacaaccagctcaagttccccgtcaagcctggagaccta
aagaagcggattgagtcgctgattgacagagactacatggagagagacaaggagagtccc
aaccagtaccactatgtggcctga
DBGET
integrated database retrieval system
