Coregonus clupeaformis (lake whitefish): 121556796
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Entry
121556796 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A-like
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121556796
04121 Ubiquitin system [BR:
cclu04121
]
121556796
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121556796
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121556796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_8
zf-C2H2_15
HVO_2718
zf-Di19
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
121556796
NCBI-ProteinID:
XP_045067306
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Position
5:5885189..5908775
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AA seq
679 aa
AA seq
DB search
MPGVKAGGIEHTSCVGSERVRGRTDHLTNMGVLQLHNPTLPATLLQRANHMRLSGTLCDV
IITVDGQEFPAHRTVLACTSKMFEILFHRSSLRYALDFLSPKTFQQILDYAYTASLQATA
EDLDDLLYAAEILEIEYLEEQCLKVLETIQSEEKQDHLSLSGRNHVSGESEHGRARHWRN
MLISKKHSMQEGGINPTALHHLALYHMTDRSPSGPGGLPMGLPVASHTQDGGVSLEGQGQ
SLLQYSLNGAQDPSLPLAKRIKTEDNNMQVDEANGYEGRSSSGGEGGCESDQPRDEGPGT
PQRGSVITSAREQHSGQEEGGIVGNNSPLDSFPGLAEKHLASLYSSMPSNHIGEGGLPMT
MSVAPSLAMSLDLRAYGGLLPQGLLHREILSRLGQFAAGMRREGQSQTQSSGDCGLQLHD
REDMEQHRKLHSGGEKGHGCEFCGKRFMDSVRLRMHMLSHSAGAEALVCDQCGATFSAED
ALEAHRQTHTGTDMAVFCLLCAKRFQTQKALQQHMEVHAGMHSYVCSHCDHLFPSHTTLK
RHLRSHTGDHPFECEFCGSCFRDDGMLRGHKRIHTGEKPYECNGCGKRFSLKHQLETHYR
VHTGEKPFECKICHQRSRDYSAMIKHLRTHNGASPYQCTICQDFCPSLAAMQKHMKSHRP
EDVPPDWGIEKTYLYVCYV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagtgaaagcaggtgggatagaacacacctcatgcgtgggctcagagagggtc
cgaggccgtacggatcatctgactaacatgggtgttctccagctccacaaccccaccctt
cccgccacgctcctgcagagggccaatcatatgcgtctgtcaggaacgctgtgtgacgtc
atcatcacggtggacggccaggagttcccggcccaccgcaccgtcctggcctgcaccagc
aagatgtttgagatcttattccaccgcagcagcctgcgctacgctctcgacttcctctcc
cctaagaccttccagcagatcctggactacgcctacacagcctccctgcaggccacggcc
gaggacctggatgacctgctgtacgccgctgagatcctggagatagagtacctggaggag
cagtgcctcaaggtcctggagaccatccagtcagaggagaagcaggaccacctgagtctg
agtgggaggaatcacgtgtctggagagagcgaacatggcagggcaaggcactggaggaac
atgctaatctccaagaagcattccatgcaggagggtggtatcaaccccactgccctgcac
cacctggcactgtaccacatgactgacaggagtccctctgggccagggggactacctatg
gggctccctgtagccagccacacacaagatggaggggttagtctggagggccaaggtcag
tctctactgcagtacagcctcaatggagcccaggacccctccctgcctctggctaagagg
ataaagacagaggacaataacatgcaggtggatgaagccaatggctacgagggccggtcc
tccagcggaggggaggggggctgtgagtcggaccagcccagagatgagggcccggggacc
ccccaaagaggcagtgtcatcacctctgctagagagcagcactcgggccaagaggagggg
ggcatagtggggaacaactctcctctggacagtttccctgggctggctgagaaacacctg
gcctccctctactcctccatgccctccaaccacataggggagggggggctgcctatgacc
atgtcggtggccccttccctggccatgtccctggacctgagggcctatggggggctgctg
ccccagggcctgctccacagggagatcctcagcaggctgggccagtttgcagcagggatg
aggcgggagggccagagtcagactcagagcagtggggactgtggtctccagcttcacgac
agagaggacatggagcaacacaggaagttgcacagtggaggagagaagggacacggctgt
gagttctgtggcaaacgcttcatggacagtgtacggctcaggatgcacatgctctctcat
tcagctggagctgaggccctggtgtgtgatcaatgtggagctacattctctgctgaagac
gctctggaggcccacagacagacacacacagggacagacatggcagtgttctgtctgctg
tgtgccaagcggttccagacccagaaggctctgcagcagcacatggaggttcatgcaggg
atgcacagctacgtctgcagccactgtgaccacctcttccccagccacaccaccctcaaa
cgccacctgcgctcacacacaggtgaccacccgtttgagtgtgagttctgtgggagctgt
ttccgggacgatggcatgttgaggggacacaaacgtatccacacaggagagaagccttac
gagtgtaacggctgtggtaaaaggttcagcctcaagcaccagctggagacccactaccgc
gtacacacaggtgagaagccatttgagtgcaagatctgtcaccagcgatccagggactac
tctgccatgatcaagcacctgcgtacccacaacggagcgtcgccctaccagtgtaccatc
tgccaggacttctgccccagcctggcagccatgcagaaacacatgaagagccacagaccc
gaggatgtgcccccggactgggggatagagaagacctacctgtacgtatgctacgtctga
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