Coregonus clupeaformis (lake whitefish): 121556808
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Entry
121556808 CDS
T08357
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121556808
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121556808
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121556808
Prokaryotic type
121556808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
121556808
NCBI-ProteinID:
XP_041726649
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MFSMTKVSLHCKFIGWLFVRHTSTGRLQSIACSEHRFPRTIFQFLRTMSTNTTDNQNWGP
KKPRAPKETLRHVKSREQRKRGVDVHGPATVYAQVVGAGSRDNGASLYVFSEFNRYLFNC
GEGTQRLMQEHKLKAARLDNIFLTRMSWENVGGLSGMILTLKDTGVPEVVLSGPPQLEKY
VNAIRVFSGPLEEIKLAVRPYTEKQHTDDTMTVSQIPIFAQLREDGPKCSPNSGRSSPSS
SPQRRELWRPEDSEDTSTDSRRERATSPGGKARATRDPSLVVAFICKLHPKKGNFLVAQA
KDLGLPVGTAAIGPLIAALKDGKSVTYEGREIHPEEVCTPTDPGPAFIVVECPSEEFVQP
ICINQQLSRYQSGGTEDPAALVVHMTPESVLKTDEYKQWMERFPSTTEHLILNEQVCTVH
NVRSHKIQTQLNLIHPEIFPELKHYKTKETQAALHVPNVRAECLLKFQLRPKIEWQRDAI
PSCDTEEFVKEAGEAPNFLQEVEECKRFRATDAAVLSGRAEQYPEVVFLGTGSALPMKIR
NVSGNLVNISATQSVLLDCGEGTFGQLCRHYGDSVDETLAKISTVFISHMHADHHTGLLS
LLFQRERALTTLGKAFSPIYLVAPVQMMTWLNQYHDHCEEILSHVNIVPSKVMCEGAEVS
KFKTKSFIQALLKKSDLEKFQTCPVRHCKNAFACSITHQSGWQLVFSGDTMPCDALAHMG
KNATLLIHEATLEDGLEDEAVEKRHSTTSQAIGIGMKMNAEFIMLNHFSQRYAKIPLFSE
DFNDRVGISFDHMRIRFGDFRILPRLIPPLKALFAEEIGEMEERRGRRELKQMKGVIAES
NEEQRTPNAGKTGKGSKREPEDPTQDVGSKRLKTN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtatgactaaagtgtctctacactgtaagtttattgggtggctatttgtgaga
cacacatctacgggtcgcctacaaagcatcgcatgcagtgaacatcgttttccccggact
attttccagtttctgcggacaatgtctacgaacacaacagacaaccaaaattggggacca
aagaaacccagagcacccaaagaaacattgcgacatgtgaagtctagagaacagaggaaa
cgtggagtggatgtgcatggaccagccactgtctacgcgcaggtcgtcggggcagggagc
cgagataatggcgcatcactttatgtcttctctgagttcaataggtacctattcaactgt
ggtgagggaacacagaggctgatgcaagagcacaagttaaaagctgctcgcttggacaat
attttcctcactagaatgagttgggagaatgttggtggtctatcagggatgatattgaca
ctgaaagacactggtgtccctgaggttgttctctctggaccaccacaactggagaaatat
gtgaatgccatcagagtattttctggaccactggaagaaatcaagctagctgttcgacca
tacactgagaaacaacacacagatgacacaatgacagttagtcaaataccaatatttgcc
cagctcagagaggacgggccaaagtgctcccctaactcagggaggagcagcccctccagt
agtccccagaggagggagctgtggaggccagaggactctgaggacaccagcacagacagc
aggagggagagagcaaccagcccaggtggaaaagcaagagcaacaagggatccgtcttta
gttgtggcattcatttgtaagcttcatcctaagaaggggaatttcttggttgctcaagca
aaagaccttggattaccagtaggcactgcagctattggtcctctcattgcagctctgaag
gatgggaaaagtgtgacctacgaaggaagagagatccatcctgaagaggtgtgcactccc
actgatccaggaccagccttcattgttgtggagtgtccctctgaggagtttgttcaacca
atctgcatcaatcagcagctgagcagataccaaagtggaggaacagaggaccctgctgcc
ttagtggtccacatgaccccagagtctgtgctgaaaacagatgaatacaagcaatggatg
gaaaggtttccatccaccactgagcacctgatcctgaatgaacaagtttgcactgttcac
aacgttaggagccacaagattcagactcagcttaatctgattcatccagagatatttcca
gagctcaagcactataaaacaaaggagacccaggctgccctgcatgtccccaatgtcaga
gccgagtgtctgctgaagttccaactcagacccaagattgaatggcaaagagatgcaatc
ccctcttgtgacactgaagagtttgtgaaagaggctggggaggcccctaacttcctccaa
gaagtggaggagtgcaagcggttccgtgcgactgatgctgcagtgctgtctgggcgggca
gaacaatacccagaggtggtctttttaggaactggatcggctcttccaatgaagatcagg
aatgtcagtggcaacttggtcaacattagtgccactcagtcagtgctgctggactgtgga
gagggcacctttggccagctgtgccgacactatggggacagtgtggacgagactcttgca
aagatctcaacagtcttcatctctcacatgcacgcggaccatcacacaggattgttgagt
ttgctgtttcaaagggagagagccttgacaactcttgggaaagccttcagccccatctat
ctggtagcccctgtccagatgatgacctggctcaaccagtaccatgaccactgtgaggag
atcctcagccatgtcaacattgtccctagcaaagtcatgtgtgagggggctgaggtgtcc
aagttcaaaaccaagtcattcatccaagcactgctgaagaaatctgatttagaaaagttc
cagacttgtccggtgcgtcactgtaagaatgcctttgcctgcagcatcactcaccagtct
ggctggcagctggtcttctctggggacacaatgccctgcgatgccctcgcacatatggga
aagaatgcaactttacttattcatgaagccacgttggaagacggattggaggacgaggct
gtggagaagagacatagtaccacctcccaggccatcggtattggcatgaagatgaatgcc
gagttcatcatgctgaaccacttcagccagcgctatgccaagatccccctcttcagtgag
gacttcaacgacagagtggggatatcttttgaccacatgaggatccggtttggagacttt
agaatcctccccagacttatcccgcccctcaaagccctgtttgccgaggagatcggagag
atggaggagaggagagggaggagggagcttaaacagatgaaaggagtcattgctgaaagc
aacgaagagcagagaacacccaatgcaggcaagacaggaaaaggttccaaacgagagcca
gaggacccaacacaggacgtgggaagtaagagactcaaaacaaactaa
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