Coregonus clupeaformis (lake whitefish): 121556833
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Entry
121556833 CDS
T08357
Symbol
asap1a
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121556833 (asap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121556833 (asap1a)
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121556833 (asap1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
SH3_9
BAR
PH
Ank
SH3_1
SH3_2
Ank_4
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
121556833
NCBI-ProteinID:
XP_045082649
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All DBs
Position
18:2972107..3182478
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AA seq
1119 aa
AA seq
DB search
MPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCKNTINVLEEALDQDRTALQKVKKSVKA
IYNSGQDHVQNEGNYGQALDKFGSNFISRDNPDLGTAFVKFSSLVKELSALLKNLLQSLS
HNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAKQHGMIRTEITG
AEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADK
LKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKESRRDSQSKQSGYSMHQL
QGNKEFGNEKKGYLMKKSDGLRKVWQRRKCSVKSGILTIAHATSNRQPVRLNLLTCQVKP
SGEDKKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALNKAFRGEQSTGGEDTLDD
LTKAIIEDVLRMPGNEICCDCGAAEPKWLSTNLGILTCIECSGIHREMGVHISRIQSMEL
DKLGSSELLLAKNIGNSSFNGIMEGNIPCPSPKPTPSSDMTVRKEYINAKYVEHKFAHRT
GKATVPGKLSEAVHSRDLLLLIQIYAEGAELMEPLPEAGKEPGETALHYSVRTADQTSLH
LVDFLVQNSGNLDSQTENGNTALHYCCLYEKQECLKLLLRGKPAIDIANQSGETALDIAR
RLQDTQCEETLMEAAEGKFNPHVHVAYEWNLRLEEIDESDDDLDDKPSPVKKERSPRPQS
FGHSSSMSTPQDKLTLPGGYTPHRDKQRLSYGAFANPVYSTSTDTPPSPGPDGTTLPSRT
AGKAPSTGPPTPLLLGSQTGGSGGSSTLKKRPPPPPPGHKRTLSDPPSPVLQGPQSKGGT
GWGSESTPPPTNRTSPGNKFEQQQSTTISNTKSTLGPRVLPKLPQKVALRKIDTMHLPSV
DKLCQPPEVLKRSTCAQLESYQKSPQPLQTPGDTPQRAPLAEKPQLSELPPKPQMSDLPP
KPQLSDLPPKPQLSDLPPKPQLKDLPPKPQLSDIPPKPPVSERLHPGEAVQTAMDGRSCS
QQGELSPRQASEDTNGSPPGAVEMPVPLPRKINTGKSKTRRVKTIYDCQADNDDELTFAE
GEVIIVTGEEDPDWWIGHIEGHPERKGVFPMSFVHILSD
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgccagaccagatctcggtatccgagttcctctcggagaccaccgaggactacaattcc
cccactacttccagtttcaccacccggttgcagagctgcaagaacacaatcaatgttctg
gaggaggctttggatcaagaccggactgctttacagaaggtgaagaagtctgtgaaagcc
atctacaactctggtcaagatcatgtccagaatgaagggaattatggccaggcactggac
aagtttggtagcaacttcatcagcagggacaaccccgatctgggaaccgcctttgtcaag
ttctccagcctcgtcaaggagctgtccgcacttctgaagaacctgctccagagcttgagc
cataatgtgatcttcaccctggactctcttctcaaaggggacctcaaaggagtgaagggg
gatataaagaagccgtttgacaaggcatggaaggactatgaggccaagttcaccaagatt
gagaaggagaagcgggagcatgctaaacaacatgggatgatccggactgagattaccgga
gctgagattgcagaggagatggagaaggagcgacgtctcttccagttacagatgtgcgag
tacctgatcaaagtgaatgagatcaaaactaagaagggagttgacctgctccagaacctc
ataaagtactaccatgcacagtgcaacttttttcaggatggattgaaaaccgcagacaag
ttaaagcagtatattgagaagcttgcagctgacctgtataatataaagcagacccaggat
gaggagaagaagcagttgacggccctaagagacctcattaaatcatctctgcagctggac
caaaaggagtctaggagagactctcagagcaagcagagtggatacagcatgcaccaacta
caggggaacaaggagtttggcaatgagaagaagggctatttgatgaagaaaagcgatggg
ttacggaaggtgtggcaaaggaggaaatgttctgtgaagagcggcatcctcactatcgca
catgccacatctaacagacagccggtgagactgaacctactgacctgccaggtcaaaccc
agtggggaggacaagaagtgcttcgacctcatctcccataatcgcacatatcatttccag
gctgaagatgaacaagagtttgtgatctggatatcggtgctgaccaacagtaaagaggag
gcactgaacaaggcgttccgcggggagcagagtacaggaggagaggacactctggatgac
ctgaccaaagccatcatagaagacgtgctacggatgcctggcaacgaaatctgctgtgac
tgtggtgcagctgagccaaaatggctgtctaccaatcttggcatcctgacgtgtatcgaa
tgctctgggatccacagggagatgggtgtccacatctcccgcatccagtccatggagcta
gacaaactggggagctccgaactcttgctggctaagaacatagggaacagtagtttcaat
ggcatcatggaaggcaatattccatgtccctcgccaaagcccaccccatcaagtgacatg
acggtgaggaaggagtacatcaacgctaaatacgtggagcacaaatttgcccaccggact
ggcaaagccacggttccaggcaagctgtcagaggcggtgcactcccgagatctgctgtta
cttatccagatatatgcagagggggcggagcttatggagcccctgcccgaggcaggaaag
gagcccggtgagactgccctccactactctgtgaggactgctgaccagacctccctgcat
ctagtggacttcctggtgcaaaacagtggtaatctagacagtcagacggagaatggaaac
actgcactacactactgctgtctgtatgaaaaacaagaatgtttgaaactgctactgcgg
ggcaagccagccatcgacatcgccaatcaaagtggagagactgctctggacattgcaaga
aggttgcaagatacccagtgcgaggaaacactgatggaggcggcagaggggaagtttaac
cctcacgtccatgtggcgtatgagtggaacctgcgactggaggaaatagacgagagtgat
gatgaccttgatgacaagcccagtcctgtgaaaaaagagcgctctccgcggccccagagc
ttcggccactcctccagtatgtccacccctcaggacaagctgacactcccggggggctac
actcctcacagggacaaacagcgcctatcctatggggccttcgccaacccagtctacagc
acttccacagacacgcctccctcaccaggacctgacgggactacactacccagcaggaca
gcagggaaagcaccctctactggcccgcctaccccccttcttctgggctcccagactgga
ggcagcgggggcagctccaccctcaagaagagacccccaccccctccccccgggcacaag
cgtaccctctcagacccccccagcccagtcctgcaaggcccccagagtaaaggtgggacc
ggttggggaagcgagtccactccaccgcctacaaacaggacctcacctggaaacaagttt
gagcagcagcagagtactaccattagtaataccaagtcaacacttggtccaagggttcta
cccaaactaccccaaaaagtggcactacggaagatcgacactatgcacctcccttcagtg
gacaagctctgccaacctccggaggttctaaagaggtcaacctgcgcccaactagagtct
taccaaaaatccccccagcccctgcagacccccggagacacccctcagagggccccgttg
gcagaaaaaccgcagctaagcgaactgcctcccaaaccccagatgtcagatctgcccccc
aagccccagctctctgacctccccccaaaaccacagctgtcggacctcccgcccaaaccg
cagctcaaggacctcccgcccaagcctcaactgagcgacatccctccgaagccccctgtc
agtgagcggctccatccgggcgaggccgtgcagactgcgatggatgggcggtcttgcagt
caacagggggagctgtcacccagacaggccagtgaggacaccaatggatccccgccgggt
gcagtggaaatgcctgtgccgctgcctcggaagatcaacactgggaagagtaaaactaga
cgggtgaagaccatctacgactgccaggcggataacgatgatgagctgacctttgcagag
ggagaggttatcatcgtcacaggagaggaggacccggactggtggatcgggcacatagag
ggacatcccgagaggaaaggggtcttccccatgtcctttgtacacattctgtctgactga
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