Coregonus clupeaformis (lake whitefish): 121556930
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Entry
121556930 CDS
T08357
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121556930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121556930
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
121556930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
Viral_helicase1
AAA_18
KAP_NTPase
AAA_14
AAA_24
Cytidylate_kin
NACHT
TIP49
AAA_25
AAA_28
NPHP3_N
AAA_5
AAA_33
AAA_17
RNA_helicase
ABC_tran
ATPase
ATPase_2
bpMoxR
TsaE
RuvB_N
AAA_30
AAA_7
AAA_11
DUF815
SLFN-g3_helicase
Rad17
IstB_IS21
Mg_chelatase
AAA_19
DUF6393
PduV-EutP
Cytidylate_kin2
PhoH
AAA_3
NTPase_1
Motif
Other DBs
NCBI-GeneID:
121556930
NCBI-ProteinID:
XP_041726754
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Position
28:complement(11827011..11834608)
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AA seq
451 aa
AA seq
DB search
MHLLQVQQNCALNSTDVQSMPYQNSGMEGDRMDVGDLKQNPNDMHNIHVEVHVKSNSTAK
RSDVKMHVLALLNRHRMVFGAYRWTEFDEDFLIKHVQSVAIVDAERKPIDLKSCSLSIHI
FTLNDDGPSTLNLEEEELSAANHWLLPAAEFHGIWESLVYESGVKTQLLDYVSTTIYFSD
KNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLSIRLLDRYSYGQFVEINSHSLFSKW
FSESGKLVTKMFQKIQQLIDDKQALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVL
TQLDQIKRYPNVVILTTSNVTEKIDLAFVDRADIKQYIGPPSVEGIFNIYLSCLEELMKC
QIIYPRQQLLTMFELETMGFRESNVSELSLLLRNIAIKSKGLSGRALRKLPFLAHALFVK
TPTVALERFLGAMDLAVDKQIEERDNLVNCL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcatctacttcaggttcaacaaaactgcgcgctaaattcgactgacgtccagtcgatg
ccgtaccaaaactcaggtatggagggcgacagaatggatgtaggggatctgaagcagaac
cccaacgacatgcacaacatccatgtggaggttcacgtcaaatctaacagcactgcgaag
aggtctgacgtgaagatgcacgtcttggccctgctgaaccgtcatcgcatggtgttcggg
gcctacaggtggacagagtttgacgaggacttccttatcaaacacgtccaatcagtggcc
atagtggatgctgagagaaaacccatagatctgaagagctgcagtctgtccatccacatc
ttcaccctgaatgatgacgggcccagcactctgaacctggaggaggaggagctctctgca
gccaatcactggctcttaccagctgctgagttccatggcatctgggagagtctggtgtat
gagagcggggtcaaaacacaactcttggattacgtctcgaccacgatttacttctcggac
aaaaacgtggacagcaacctgatctcatggaaccgggtcgtcctgcttcatggacccccg
ggcacagggaagacgtctttgtgtaaagctctggcccagaagctgtcaatcagactattg
gaccggtactcttatgggcagtttgttgagatcaacagccacagtttgttctccaagtgg
ttctctgagagtggtaaactggtcactaagatgttccagaagatccaacaactgatcgat
gacaagcaggctctggtgtttgttctcatcgatgaggtggagagtctgacggcagcgcgg
aacgcctcccaggccggaacggaaccctcagacgccatccgagtggtgaactctgtcctc
acacagctggaccagatcaagcggtatcctaatgttgtgattctgaccacctccaacgtg
acagagaagatagacctggcgtttgtggacagagcagacatcaaacagtacatcggccct
ccgtctgtagagggcatcttcaacatctacctgtcctgcctggaggaactcatgaagtgc
cagatcatctaccccagacagcaactgctgaccatgtttgagctggagaccatgggcttc
agggagagcaacgtgtcagagctcagcctgcttctcaggaacatcgccataaagagcaaa
gggctcagtggaagagcgctgaggaaactaccctttttggcccacgctctttttgtgaag
accccgacagtggccctggagaggttcctgggggccatggacctagcagtggacaaacag
atagaggagagggacaacctagtcaactgtctgtga
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