KEGG   Coregonus clupeaformis (lake whitefish): 121557026
Entry
121557026         CDS       T08357                                 
Name
(RefSeq) striatin-4
  KO
K17608  striatin 1/3/4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121557026
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     121557026
SSDB
Motif
Pfam: WD40 Striatin WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IP5PC_F Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_HPS5 Nucleoporin_N Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_RSE1_2nd PA14
Other DBs
NCBI-GeneID: 121557026
NCBI-ProteinID: XP_041726851
LinkDB
Position
5:11862059..11886562
AA seq 775 aa
MEAERSGGVAGGTNQNSGGSGVGRNPNGPKSVLGQGTTEAAAAAATAGAMAGSSQPREPQ
DGDAGLSLPGILHFIQFEWGRFQAEKYRWEAERDELRAQVTFLQGERKGQENMKQDLVRR
IKMLEYALKQERTKHQKLKTGSDQSPGEKKPETEAEQVPNGPAESESEQANQMSWKEGRQ
LLRKYLEEVGYSDTILDMRSKRVRSLLGHTSPEANGAPASSEQQPTPDPEPLAGGEPLLI
RQIEEQIKRNAAGKDGSKERLGGSVLDKIPFLHGCEDDDEDDSDEEDDFQGTDCIDGQRN
KNKKPRVKIGTEPMTTDLDPDDEEDEDDSEDALSEFDFLGSGEEGEGAGEARISGDGREL
GTPSSYNVEPQEQVPGHDVGLPPKPSPPPSVSGQSRSGEGGALGFSSDVFILDAVGGGDM
NLGELADLTVANDNDLTVDLQDNREEFKKTWNPRFTLRSHFDAIRALTFHPSQAVLLTAS
EDGTLKLWNLNKAIHSKKNAALDVEPIYTFRAHSGAVLSLAMGEDGDSCYSGGLDGTVRC
WKIPDINVDPYDNYDPGIESSVLSGHEDSVWSLTYSATHHRLASCSADGTIRIWDPQNST
PCLSVFNKEKEHGMPTSVAFVNSDPDQAVVSFDGGETLLYDLNTEQSIMVLETGTKDGSE
LINCVVSHPSEPISITAHENRTIRYLDNKTGKVIHSMVAHLDAVTCLTTDPKGTYLISGS
HDCSVRLWMLDNRTCVQEITAHRKKHDEAIHDVAFHPSQPFIASAGADALAKIFV
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggaggcggaaagatccggcggagtagcagggggaacaaaccagaactctggaggcagc
ggtgtggggcgcaacccgaacggaccgaaatcagtactcgggcaggggacaacagaagcg
gccgccgcggcagcaacagccggggcgatggctggttcgtcgcagcctcgggaaccgcaa
gacggcgacgcaggcctatcgcttcctgggatcttgcactttatccagttcgaatgggga
cgcttccaggccgagaaatatcgttgggaagccgagagagacgaactcagggctcaggtg
accttcctgcagggtgagaggaaggggcaggagaacatgaagcaggacctggtcaggcgg
atcaagatgttggagtacgcccttaaacaggagaggaccaaacaccagaagctgaagaca
ggcagtgaccagagcccaggggagaagaaaccagaaaccgaggcagaacaagtgcccaat
gggccagcagagtctgaatctgagcaagccaatcagatgtcctggaaggagggccgtcag
ctactgcgcaagtacctggaggaggtgggctactcggacaccatcctggacatgcgttca
aagcgtgtgcgctcactgctgggtcataccagccccgaggctaacggtgccccggccagc
agcgagcagcagcccaccccagaccccgagcccctggcagggggggagccactcctcatc
agacagatagaagagcagatcaagaggaacgcggcggggaaggatggttctaaggagcgt
ctgggcggctcggtgctggataagatccccttcctacatggctgtgaggatgatgatgag
gatgacagtgatgaggaagatgacttccagggcacggactgtatagacgggcagcgcaac
aagaacaagaagccccgcgttaagatagggactgagcccatgaccacagacctggaccct
gatgatgaggaggatgaagacgactctgaggatgccctgagcgagtttgacttcctggga
tcaggggaggagggggagggggcgggagaggcccgtatctcaggggacggccgggagtta
ggtacgccatcatcatacaatgtagaaccgcaggaacaagttccagggcatgatgtcgga
cttccccccaaaccctccccgcccccctctgtttcgggacagtctcgctccggggaaggt
ggcgctctgggtttttcctctgacgtcttcatcctggacgccgtcgggggtggagacatg
aacctgggagagctggctgacctcaccgtcgccaatgacaacgacctcaccgtggatctg
caggataaccgggaggagttcaagaagacgtggaaccctcgcttcacgctgcgtagccat
tttgatgccatcagagctttgacgttccaccccagccaggccgttctactcacagcctcc
gaggacggaaccctgaagctgtggaacctcaacaaggccatacattccaagaaaaatgca
gcgctggacgttgagcccatctacaccttcagagcccacagtggtgcagttctgtctctg
gccatgggtgaggacggcgactcatgctacagcgggggtctggacggaaccgtgcgctgc
tggaagatcccagacatcaacgtggatccctacgataactacgacccgggcatagagagc
agtgtgttgtcgggtcatgaggactcagtgtggagtctgacgtactctgccacccaccat
cgcctggcctcctgctctgcagacgggaccattcgcatctgggacccccagaactctacc
ccctgtctctccgtcttcaacaaggagaaagaacacggaatgcccacctctgtggccttt
gtgaactctgaccccgaccaggcggtggtgtcattcgacggtggcgagacgctgctctat
gacctcaacacagagcagagcatcatggtcctggagactgggactaaggacggcagtgag
ctgattaactgtgtggtcagccacccctctgagcccatctccatcaccgcacacgagaat
cgcactatccgctatctcgacaacaagacaggtaaagtgatccactccatggtggcacac
ctggatgctgtcacctgtctgaccacggaccccaaaggcacttacctcatctctggcagc
cacgactgttcggtgcgtctgtggatgctggataacaggacgtgtgtgcaggagatcact
gcccacaggaagaagcacgacgaggccattcacgacgtggccttccacccctcgcagccc
ttcatcgcgtcggccggcgccgacgcactcgccaagatcttcgtctga

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