Coregonus clupeaformis (lake whitefish): 121557065
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Entry
121557065 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121557065
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121557065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
BAR
SH3_2
SH3_9
SH3_1
SH3_3
Motif
Other DBs
NCBI-GeneID:
121557065
NCBI-ProteinID:
XP_045070712
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MDPNKEANNGSEKEKEKEKDKVIKRRTRPNFLRYMHLERRKTDTIVVANDDTAADIKGDI
NLGTLVRRSQSDKTEYSAKLKEKMAPLSSLSSILASPALEPEEVRLRKMSRRSKVIQELV
QTERDFLTDLELCIREVVKPLRDRQVVDVDRLFTNMETVCEVSAALLHRLQEATAEPDPE
ALVIGEVFIQAKAALEDVYKIYCYHHDDANSLLKSYEKEEGIKQHFITCVLSLKQIYNQE
GKPNLLDMGSLLIKPVQRVMKYPLLLGELWQATPSDHPDNRPLQEALTAAKIINVNINEF
KRRKDIVMKYKRTEEDGGTLMGKLNKFSIHSIRKKSDRLTGHLKILTGVEPQVRDEIFDK
EEKLFRSLEKAVRQLVKNVHCYLIHIQEMVGVAVQNAADLEDIMKDPDKIDTNSTQHLKN
GNDPYKHFKERMTHLVLAPLASLQGMFAAPQKLIQKRYDKLLDYCSRLERSPSSSSSSSS
STSSASASSSSPSPVSEDQGQVAARRDYVALNAQLVEELQRFNMAAHTILSNCVLCLVTL
LKGLMDTACHHAPSIQQLPAPLSNISEVQSSIMDELNNLTVVKDNAQTLIERKVSFEKTK
KILAVPEIQRQTEGNRARLLEEYPADRLYQLKRNCNGCQEQDVSLLEGELVGLLKDTDPL
GSRGRWLVDTGSTQGYVYSSFLKQYNPNRDQGRPGQGTGTTEPQQSIVVLDEDFDNLSLF
VSGSGRNNSIRSRSSIRSMGSIPNFSLYNTSSTSLDSCSTPSSLQGDTEPDVRQDVDTET
DDQQFYAVYAFKARCDQELTLQEYQHVRILKFSDLGGNKDWWLAEANGQKGYVPANYLSK
MSYA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacaaggaggccaacaacggcagtgagaaagagaaggagaaggaaaaagac
aaagtcatcaagaggagaaccaggcctaactttctgcggtacatgcacttggagaggagg
aagacggacaccatcgtggtggccaacgatgacactgccgccgacattaaaggggacatc
aatctggggaccctggtgcggaggagtcagtcggacaagacagagtacagtgccaaactt
aaagagaaaatggctcccctgtcctccctgtcgtcgatcctggcctccccggccctcgag
cctgaggaggtccgcctgaggaaaatgagccgcaggtcaaaggtcatccaggagctggtg
caaacagagagggacttcctcaccgacctggagctctgcatcagagaggtggtcaagccc
ctcagagacagacaggtggtggacgtggatcgtctgtttactaacatggagacagtgtgt
gaggtgtcggccgcgctgctccaccggctgcaggaggccacagctgagcccgaccctgaa
gcactagtcataggggaagtgttcattcaggccaaagcagcgctggaggacgtctataaa
atctactgctatcaccacgacgacgctaactctttactcaagtcctatgagaaagaggaa
ggaataaagcaacatttcatcacctgtgtgttatcactgaagcagatatacaaccaagag
ggtaaacccaacctgctggacatgggttctctgctcatcaaaccggtccagcgggtcatg
aagtaccctctgctgctgggggagctgtggcaggccacgcccagcgaccaccctgacaac
aggcccctccaggaggccctgaccgccgccaagatcatcaacgtcaacatcaacgagttc
aagaggaggaaggacatcgtgatgaagtacaagaggacagaggaggatggggggacactg
atgggtaaactgaacaagttcagcatccactctatcaggaagaagtctgacaggctcaca
ggacacctcaagatcctcaccggtgtggagccacaggtgagagatgagatatttgacaag
gaggagaagctgttcaggagtctggagaaagcagtgagacaactagtcaagaacgttcac
tgttacctgatacacatacaggagatggtaggtgtcgcggtccagaatgctgcagacctg
gaggacatcatgaaggatccagacaaaatagacaccaacagtactcagcacctgaagaac
ggcaatgacccatacaagcactttaaagagaggatgacgcatctggtcctggcacccctc
gcctccctccaaggcatgtttgctgccccgcagaaactcatccagaaacgctacgacaaa
ctactggactattgcagccgcctggagcgctctccctcctcctcctcctcctcctcctcc
tccacgtcttcagcctctgcctcttcctcctctccatcgcctgtatcagaggaccagggc
caggtggcggcgcggcgggactacgtagccctcaatgctcagctggtggaggagctgcag
agattcaacatggccgcccatactatcttgtccaactgtgtcctctgcctggtgactctg
ctcaaaggcctgatggacacggcctgccaccacgcaccctccatacagcaactaccggct
cctttgtccaacatcagtgaagtccaaagcagcatcatggatgagctcaacaacctgact
gtcgtcaaggacaacgcacagactctaatagaacgcaaagtcagcttcgagaaaacgaag
aaaattttagctgtcccagagatccagcgtcagacagagggcaacagggccaggctgctg
gaggagtatccagctgacaggctgtaccagctgaagaggaactgtaacgggtgtcaggag
caggatgtcagcctgctggagggggagctggtgggcctgctgaaggacacagaccccctg
gggagccggggccgctggctggttgacactggcagtacccagggctacgtctactcatcc
ttcctgaagcagtacaaccccaacagggatcagggtcgaccaggtcagggtacagggacc
acagagccccagcagtccatcgtggtgctggacgaggacttcgacaacctcagcctgttt
gtgtcgggcagcgggaggaacaacagcatacgaagccgaagcagcatacggagcatgggc
agcatacctaacttcagcctctacaacacctccagtacctcgcttgacagctgctccacc
ccatccagcctacagggggacacagagccagacgtccgccaggatgtggacacagagaca
gacgaccagcagttttatgcggtgtacgcattcaaggcgcgctgtgaccaggagctgacc
ttgcaggagtaccagcacgtgaggatcctcaagttcagcgacctgggaggcaacaaggac
tggtggttggccgaggccaatggacagaagggctacgtcccagccaactacctcagcaaa
atgtcatacgcataa
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