Coregonus clupeaformis (lake whitefish): 121557215
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Entry
121557215 CDS
T08357
Name
(RefSeq) myomesin-3-like
KO
K24495
myomesin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121557215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121557215
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121557215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
Tissue_fac
C2-set_2
Adeno_E3_CR1
CRLF2-like_D2
Ig_J_second
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
121557215
NCBI-ProteinID:
XP_045069705
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MATKMLTTRVQEEQSHQMSHSMALASQIKKKTFTSSDEEASYSEFYPIIPGDVMSVKEIL
NIGKFPRHRTWDVLKETMAADEQGLRTGEKWTLFGNEAEKVEVEVLREQHYIRQRCDRMA
LRRQAEQKASIHLKYLEDLSQKAPDFPIPLRAHMVWESMGVKLSCTVQGCPPPRVTWYKD
GVPLSAYGQAWNYSLKQKFGLNSLEIRRCSVEDAGEYKVVAKSSLGEATTIATLVVNSYQ
GAKAAIEKSWTPIAMLEREALFEFSFPPTWVKEGDNLTLQCAFSSALLPFQQDVAWFRDG
VKLCQSSRVELQTALRSTSLTLKGVHKEQEGMYMVRLRTWEGVKEHKAYIFVKDASAVVS
GGPGSPLALKVSDVQKDYVFLTWEPPSADGAYQVEGYFVERCDTGSGQWVRCNDTIQKAC
HYPVRGLSDSTIYQFRVCAVNQAGVGRPSKATEPVITTDPLEHTRTMVIKVDRGREITIT
KDQLESQMKVPFPPTGVHACEVSDSYAVLSWTEPEPRGKEQLTFYVERSIAGKNSWQLAS
MDITVGSPRFPMFNLQKGKSYCFRVRSVNKFGVSEPSEPSPPISLGQPQAAPAPATSVLA
IRDTDSAVLLQWQEPKEKEGILGYYLYYSEVGKQEWRTVNNKPTTNSKFTVHGLKSKKEY
VFRVKSVGRAGNSIYSNESPPVLVKAALIAPSPSSAIALLLCTGSEMILTWRAPANNGGD
PVRGYYLDQKDKELDAWRKVNTKPAKERQHKVCNLDGGHYYQFRVFAANVVGVGKPSEPS
EAFLCEEWTMPEPGCPYDLEFREVRHNSLVLLWAVPLYEGQQGPITGYLVELSGGDQSQS
WTAVNEEPITDTFFKVSGLQAGQTYRLRVCALNKAGVGIPSLPSELIRAQTQPGTRDIEI
GVDNDGFIFLAFEATEITEKSKFVWSKNYKGAIEAGRARVLWENNRSILTFTNATKEDLG
LYTVEMSDNPDISSSFTFTAEDLERLTELGWHICHPLIALRSKWQVEVSEKGNVRLWMQT
ESLSNAAELHLILNDREISSTAARKINFDKASGLIEILFDQLSKEDEGSYTAQLCDGRAK
NQFTLVFVDEMFRQTLAQSIANRMDYKRKSGPYFLEFLSWTVTEDCEFIIKCKVTNINKD
TTLKWFKDGVETPGVYDEQTGVSTMTVQQVTKKEAGHYEAVVSDGRGQDVSTLELLNEEY
DKLLQLLSKQCALSAGPVRIQCTAVGFKLYCSLKYYISYMKTSWHFKESRIDQLERCKPG
SSMQKLWVEVFAPTENDKGKYTLEMFDGQEKHTRSLDLSGQVFADALLEYQRLKQVAVAE
KNRARVTKGLPDVVAIMENKSLCLTCFADGDPAPEMFWLRNDKGIVSGGQFNIANENKCS
TLTVNNVTSEDSGNYSIFVRNQYGTQTVNVTVSVYKHGEKPPPDAVEM
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaagatgctgacgacacgggtccaggaggagcagtcccaccagatgtctcac
agcatggcgctggcctcacagatcaagaagaagaccttcacctccagtgatgaggaggct
tcctactctgagttctatcccatcatccccggtgatgtgatgtcggtcaaggagatcctg
aacatcggcaaattcccacgccacaggacatgggatgtcttgaaggagaccatggcagcg
gatgagcagggtctgagaactggagagaagtggaccctgtttggaaatgaggctgagaag
gtggaggtggaggtgctcagggaacagcattatatccgccaacgctgtgaccgcatggcc
ttgcgtaggcaggctgagcagaaggcttccatccatttgaagtatctggaggacctgagt
cagaaagccccagacttccctattccgctgagagcccacatggtgtgggagagcatgggg
gtcaaactctcctgcaccgtccagggatgcccacctccacgggtcacctggtacaaggac
ggggtacctctgagtgcctatggccaggcctggaactacagtctgaaacagaagtttggc
ctcaactcgctggaaatcagaaggtgctctgttgaggatgctggggagtacaaggtggtt
gccaagagttctttgggtgaagctactaccattgccactctggtggtcaactcatatcaa
ggagccaaggccgcaatcgaaaaatcctggaccccaattgcaatgctggagcgggaggct
ctgtttgagttcagcttccctccgacctgggtgaaagaaggggacaacctgaccctgcag
tgtgccttctcctcggccctgctgcccttccaacaggacgtggcctggttcagagatgga
gtcaaactgtgccagtccagcagggtggagcttcagactgcccttcgctccacctccctc
accctgaagggcgtgcacaaggagcaggagggcatgtacatggttcgtctgcgtacctgg
gagggggtcaaagagcataaagcttacatttttgtcaaagatgcgtctgcagtagtgtct
ggtggtccaggctctcctctggccctgaaggtttctgatgtacaaaaggactatgtcttc
ctcacctgggagccccccagtgctgatggagcctaccaagtggagggttactttgtggag
aggtgtgacactggtagtgggcagtgggtgcgttgtaatgacaccattcagaaggcatgt
cactacccggtgaggggtctgagtgacagcaccatctaccagttcagggtgtgtgccgtc
aaccaggcaggtgtaggacgcccctctaaggctaccgagcctgtcatcaccaccgaccct
ttagaacacaccagaactatggttatcaaggtggacagaggtagagagatcaccatcacc
aaagaccagctggaaagtcagatgaaagtcccgttccctcccactggtgtccatgcctgt
gaggtgagtgacagctacgccgtgctgagctggaccgagccggagcccagaggcaaagag
caacttaccttctatgtggagcggtccattgcagggaaaaacagttggcagctggccagc
atggacatcacggtgggctctcccaggttccccatgtttaacctacagaaggggaagtcc
tactgcttccgggtgcgctccgtcaacaaatttggcgtgagcgaaccctcagagccgagc
ccgccaatctcactgggacaaccccaagctgctcctgctccagccacctccgtcttggcc
atccgagacacagattctgctgtcctgcttcagtggcaggagcccaaggagaaggagggc
attctgggatactacctgtactacagcgaggttgggaagcaagagtggaggacagtcaac
aacaaaccaaccaccaacagcaaatttacagtacatggtctgaagtcgaagaaggagtat
gtgttcagagtgaagtctgtggggcgagctgggaacagtatctactccaacgaatctccc
cctgtcctggtcaaagcagctctcatcgccccatccccttcctctgccatcgccctgctg
ctctgcactggctctgagatgattctcacctggagagcccctgctaacaatggaggagac
cctgtacgaggctactacctggaccagaaggacaaagagctggacgcctggagaaaggtc
aacaccaagcctgccaaggagaggcagcacaaggtctgtaacctggatggggggcattac
tatcagttccgtgtttttgctgccaacgtggttggggttggtaaaccctctgagcccagt
gaggctttcctgtgtgaggagtggaccatgcctgagccaggctgcccttatgacctggaa
ttcagggaggtgaggcataactctctggtcctcctgtgggcggtacctctctacgaagga
cagcagggaccaatcacagggtacctggtggagctgagcgggggcgaccaatcacagagc
tggactgctgtgaatgaagagccaatcacagacacctttttcaaggtgtcaggtctccag
gcaggtcagacttatcgtctcagagtgtgtgccttgaacaaggctggagtgggcatccct
tctctgccctctgagcttatcagagcccagacccaaccaggcaccagagacatagagatc
ggtgtggacaatgatggcttcatcttcctggcctttgaggccacggaaattacggagaag
agcaagtttgtctggagcaagaactacaaaggggctattgaagctgggagagccagggta
ctgtgggagaacaataggtccatcctaacctttacaaacgccactaaagaggacctgggc
ctgtacacagtagagatgagtgacaacccagacatctcttccagtttcacctttactgcg
gaagatctggagagactgaccgagctcggctggcacatctgccacccattgatagccctg
cgctccaagtggcaggtggaggtgtcagagaaagggaacgtgcgtctctggatgcagact
gagagcctgagcaacgctgcagagctccacctcattctcaatgacagagagatctccagt
actgcagcccgtaagattaactttgacaaggccagtgggctgatagagatcctgtttgac
cagctgtctaaggaggacgagggttcttacacagctcagctctgcgacggccgcgccaag
aaccagttcaccctggtgttcgtggacgagatgttccgtcagacactggctcagtccata
gccaacagaatggactacaagagaaagtcaggaccctattttctggaatttttgtcatgg
accgtgacagaggactgtgagtttatcatcaaatgcaaggtgaccaacataaacaaggat
acgactctgaagtggttcaaggacggtgtggagactccaggagtgtacgacgagcagact
ggagtcagcaccatgactgtgcaacaggtgactaagaaggaggcaggccactacgaagct
gtggtgtctgatggtagaggacaggatgtgagcacactggagttactaaatgaagagtat
gacaagctcctccaactcctgagcaaacagtgtgcgctgtctgcaggaccagtgaggatc
caatgcactgctgtgggcttcaagctctactgctctctcaagtactatatcagctacatg
aagaccagctggcacttcaaggagagtaggattgaccagttggagaggtgtaagcctggc
agcagtatgcagaagttgtgggtcgaggtctttgcgcccacggagaacgataaggggaag
tacaccctggagatgttcgatggtcaagaaaagcacacacgctcactagacctatctgga
caagtctttgctgatgctctgttggaataccagaggttgaagcaagtggcggttgctgag
aaaaatcgggccagggtgaccaagggcctaccagatgtggtggctatcatggagaataag
tctctgtgcctgacctgcttcgctgacggtgaccccgccccagagatgttctggctgagg
aacgacaaaggcatcgtctcggggggccagttcaacatcgccaatgagaataagtgcagt
acactgaccgtcaacaatgtgactagcgaggactcgggcaactacagcatctttgtgcgc
aaccagtacggcactcagacggtcaatgtgaccgtgagcgtgtacaagcacggcgagaag
cccccgcccgatgcagtggagatgtaa
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