Coregonus clupeaformis (lake whitefish): 121557548
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Entry
121557548 CDS
T08357
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121557548
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
121557548
NCBI-ProteinID:
XP_041727073
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Position
29:62693447..62697569
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AA seq
699 aa
AA seq
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MLLWIVLLKAALCVAIGNVTRDICKEQICSCNEIEGDLHIDCEKRSFTNLHHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTVPYEGVLEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPQNALIGRVI
CEAPTPLQGNDLNETSEMVLCPSLKSDADESLVAPPTQDETSEPGPVPTPYKASGDPGSP
TPGNGQKGRSKSHWQLKTKPTSMTGVNGEREQLQIVQNASCPVPCSCKLIGSRQGLGVNC
EGKKIESLANLKPKPLTAHELNMRDNNIHAIKKNHLNGYSSLNLLDLGGNNIKVIDNSTF
QNLTELRWLYMDKNYLDTLIMEMFIGLQNLEYLSLEYNDIQLIVAGTFSPLPNLRVLFLN
NNLLKALPVDAFLGVSLSKISLHNNYFTYLPVVGVLDQLNSIIQIDLHGNPWDCSCNIVP
FKQWTEKLGADVIVSDLKCESPEEFWKRDFRHVRNDLMCPKLYDKIYPTSLSKNSTFTAD
TGTRSNSYVEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSSASEI
NSLQTVCDSSYWHSGPYHADGGAQRGFDCSDHFSTTNDA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgtcttgctgaaggcggctctttgtgttgctattggaaatgttaca
agggacatttgtaaggagcagatctgctcctgcaatgagattgaaggcgatttgcacatt
gactgcgaaaaaaggagcttcactaatctgcaccatttgactggtcccagttcccagttt
tatcacttgctattgcatggaaattctttatccaggctttttcccaatgagtttgctaac
ttctacaatgccgtaagcttgcatttggaaaacaacggtttgcatgacattgtccctgga
gcttttctgggactgcagctcgtgaaaaggctacacataaataataacaagatacggtca
tttaggaagagcacctttcttggtttagatgacttggaatatcttcaggctgattttaat
ctattgagagacattgacccggccgtgttcagggacttaaataaacttgaagtgttaatt
ctaaacgataacctcatcagtgcactacctataaatgtgtttcaacatgttcccatcacc
cacctcgacctgcgagggaaccgaatcaaaacggtgccttatgagggagttctcgaacaa
ataccgggcattgcggaggttttattggaggataacccctgggactgcaactgcgacctg
gtttccctgaaggaatggctggagaatataccgcagaacgcgcttatcggccgggtgatc
tgcgaggctccaacgccactgcaagggaacgacttgaacgagacatcagagatggttctg
tgtccttcattaaaaagtgatgctgacgagagtttagttgcacctcctacccaagacgag
acctccgaaccagggcccgttccaacgccttataaagcgagtggtgatcctgggtcccca
acccctgggaatgggcaaaagggacgctctaaatcgcactggcagttgaaaacgaagccc
acatccatgacaggtgtgaatggggagagagagcagctgcagattgtgcagaacgcatca
tgtcccgtgccatgcagctgcaagctcattggatccaggcaggggttaggggttaactgc
gagggcaagaagatagagagcttggctaacctaaaacccaaacccctcactgcacacgaa
ttaaacatgagagataacaacatccatgctataaaaaagaaccatctcaatggctattca
agtctgaatctccttgatttggggggaaacaacatcaaagtgatagacaacagtactttt
caaaaccttaccgaattaagatggttgtacatggataagaattacctggatacactcatt
atggaaatgttcattggacttcaaaatctggaatatctcagtttggaatataatgacata
cagctgatagtggcaggcacattcagccctctgcctaatctgcgagtgcttttcctcaac
aataacttgctgaaagcgctacctgtggatgctttccttggagtgtctttatcaaagatt
agcctgcataataattatttcacatatctccctgttgtaggggttttagatcagctcaat
tcgatcatacaaattgatttgcatgggaacccttgggattgctcgtgtaatattgtccct
ttcaaacagtggacagagaaactgggggcagatgtgatcgttagtgatctcaagtgtgag
tccccagaagagttctggaaaagggatttccgtcacgtcagaaatgatctgatgtgtccc
aagctgtatgacaaaatctaccccacctctctctccaaaaacagcactttcaccgcagac
acgggtacgcgctcgaactcctatgtggagccgaacagggtatccatctctgtactagtc
cctgggctgctactggtatttgttacgtctgcgttcactgttgtagggatgcttgtcttc
atcttgcggaatcgcaagagatcaaagcggagggatggtaattcctctgcgtcagagatc
aattccttgcagacagtgtgcgactcatcttattggcatagcgggccttaccatgcggac
gggggcgcgcaaagagggttcgactgtagcgaccatttctccacaacaaatgatgcgtaa
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