Coregonus clupeaformis (lake whitefish): 121557550
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Entry
121557550 CDS
T08357
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121557550 (slitrk6)
04517 IgSF CAM signaling
121557550 (slitrk6)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LapA_dom
FtsL
Motif
Other DBs
NCBI-GeneID:
121557550
NCBI-ProteinID:
XP_041727074
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Position
29
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AA seq
836 aa
AA seq
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MLPCIVFLCSFFAAACFQDIQPSKAFLSESCDSLCTCEEKDGILYLNCEERNISKISQIK
VPSALPFHLNLYKNDLVELCAEDLEGLKNAVSLHLGANSIQELEPGVFSALGSLKKLHIN
SNFLVMLKEDTFHGLVNLEFLQADTNFIRVVEPGAFNKLIRLKVLILNDNTIKFLPSNIF
RFVPLTHLDLRGNQLQTLPYVGFLEHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQS
AIGEVVCSSPHHLRGTILAKIKRDVLCPSHADINLEEPSKSLDMVVTPSSKVAEIPKLED
AKDDAKIPTPAYVPGSPCVEHCSCHNHPVAGFLMHCQDRGIQRISDIGILEQSPTKLVLT
GNMIQRLLKYDFVTYDGLELLNLANNRIDYVDNETFLSLSNLKKLYLNGNRIETLSATMF
IGLHNLEYLYLEYNIIKEIVPGAFNPLPNLKLLSLNNNLLTSLPLQIFRNVPLTKLNLRK
NLLIHLPVSNVLDQLDSLEQIYLEDNPWDCSCDLVSLKQWVEKLRKDTVIGSILCHTPRK
VAKAELRALRNELLCPGLVTYSLPTDEDESVTSTVAIDGARSGFFSSITDSVPLSVLILS
LLVIFLMVIFCSAGIVVYLVHRRRRSVKKKQAEEQPRESSSPIHLQYSMYGQKTTHHTLA
QRTGSPVYDERSHSPIVQICRNPTYCAQHKEYDTDLDELDEPKHICRSIMETENTSPLTG
SNLKFRAVTSDCPTEFVTLGDASSLYKNILERERVRELQQLGITEYLRKNMSQLQPTVEM
QVPGHHEELKLMETIMLSGPRKVMVEQTKNEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgctaccctgcatcgttttcctttgctcttttttcgctgctgcttgtttccaagacatc
cagccctccaaggcatttctgagcgaatcctgtgactcattgtgtacttgtgaagaaaaa
gatggcatcctgtatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaa
gtgccgtcagctctacctttccatctcaatctgtacaaaaacgacttggtggagttgtgt
gcagaagacttggaaggtttaaagaatgccgtttcgcttcatctcggggctaatagcata
caagagcttgaacctggggtcttcagtgcactgggctccctgaagaagctccacatcaac
agtaatttcctggtcatgttgaaagaagacacttttcacggcttggtaaatttggagttt
ctccaggcggacacaaacttcattcgcgtggtcgagccaggggcattcaacaaactcatc
cgcctcaaagttctgatcctcaatgacaacaccatcaagtttcttcccagcaatattttc
cggtttgttccgctcacccacttggacctgcgggggaaccagttacagaccctgccttac
gttggcttcctggagcacattgggcggatcatggagcttcttctggaggacaacgactgg
atgtgcgattgtgagatccttcacctaaagatctggatggagaacatgcgggcccagtcg
gccattggggaggtggtctgcagcagcccccaccatctcaggggcaccatcctggccaaa
atcaagcgggatgttctctgcccctctcacgccgatatcaacttagaggagccttccaag
tcactggacatggtggtcactccgtcttccaaagtggcagagattccgaagttggaggac
gccaaggatgacgcaaagattccgacacctgcttatgttccagggagtccttgtgtggag
cactgttcttgtcacaatcaccctgtggctgggtttttaatgcattgtcaggacagaggg
attcagcggatatcagatattggaatacttgagcaaagccccaccaagctggtgctcaca
ggaaatatgattcagagactgttaaaatatgactttgtcacatatgacggtttggagtta
ttaaatttggccaacaatcgaatcgattacgttgacaatgaaacttttctcagcttaagc
aatttgaaaaaactttatctcaacggcaacagaattgaaacgctttccgcgaccatgttc
attggactccacaaccttgaatacctatatttggaatacaacattatcaaagaaatagtt
ccaggagcttttaatcctttgccaaatctcaaactcttgtctttgaataacaatctgctg
actagtctcccattgcagatatttcgcaacgtgcccctcaccaaactgaacctgaggaaa
aatctgctcattcacctgcccgttagcaacgtgctggaccagcttgactctttagagcag
atttatttagaggacaacccctgggactgcagctgtgacttagtcagtctcaaacagtgg
gttgagaagctgaggaaggacacagtcataggttccattttgtgtcacacaccgagaaaa
gtggcaaaggctgagctgagggccctcagaaatgagttgctgtgccccggcctagtgacc
tactccttgcccacagacgaggacgagagtgtgacaagcacagtggcgattgacggcgct
aggagcggtttcttcagctccatcacggactcagttccgctctccgttctgatccttagc
ttgctcgtcatcttcctcatggtcatcttctgttcggcgggcatcgtggtgtacctcgtg
cacagacggcgaaggagtgtgaagaagaaacaggcggaggagcagccgcgggagagtagc
agccccatccacctgcaatacagcatgtacggccagaaaaccacccaccacacactggca
cagaggacaggaagccctgtgtacgacgagcgctcacacagccccatcgtccagatctgc
cgcaaccccacctactgcgctcagcataaagaatatgacaccgacctcgatgaactggac
gaaccaaagcacatctgtcgtagcatcatggagacagagaatacttcccctctcacaggc
tctaatttgaagttcagagctgtgacgtcagactgcccaactgagttcgtaacactcgga
gatgcgagctccctctataaaaacatactagagagggagagggttagggagctgcagcag
ctcggaattacggaatacctcagaaaaaacatgtcccagctgcaaccaacggtagagatg
caggtcccaggacaccacgaggaactgaaattaatggagactattatgttgtcgggaccg
cggaaggtcatggtggaacaaacgaaaaatgagtactttgaactcaaagctaacctacac
accgagccagattatttggaggttctggagcatcaaactgcatttaactga
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