Coregonus clupeaformis (lake whitefish): 121557563
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Entry
121557563 CDS
T08357
Name
(RefSeq) F-box/LRR-repeat protein 18
KO
K10284
F-box and leucine-rich repeat protein 18
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121557563
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121557563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_FBXL18
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
121557563
NCBI-ProteinID:
XP_045074332
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSSSGNGGVLEEDMDNQIVQAVCVDDGIGVMSGSIGMSDFSDEILLSILRYVSTSDLVNN
VSRTCRKLHTLCYDKTLLTTVTLSEEYTANDGAIRQVLKHLSNHVQSLSLSGCYWLSGST
IDRLIGCRSLVRLDLSGCRLTSLRLSRLLSSLSLLQSLAFDVAPGFDSAQLSGEARDSLS
RLSELRQTVLTPSYGVVPCCSRLFSLQLQLDIPDVTREGSSVCCQLMIGQSSVPHYQQLE
EFTARLAPGEVNQTLLLLYLAVFSVRVPERLRCFLVSVPGPNPAHWPAASSLAHSLCQHG
DLEALQLPRSWLDATSLGGSFLATLPSTSTSPVAPTLRQTVIQSLTGARPRQTHALLRSL
ALPACALSDGPAAPSPSPPPPSPLLGLRKPSRVGLRTYRPRSEDSLPREGASSGLGTLLA
GCPSLEVLELTGPGFVSALPRLEPCARVCVDQRVCVCAGGVGDAHVAALRGFRGLRRLTL
AGLPGILKGNGLVQVSEHCRDLQALSLANLGSLKTWNYSAALLETLRNCTQLTELRLEQP
YLVCSGAFWEALSCCSRLCRLCRLSNGTFHPAAVVTFMERCRDVMVCHMFLGGTLVACRT
RRKHYRFSVERPALSVVIYPLLHEDLPLVIRDMPLPLLDQLTLFQSRVAQAPPSSQWRRQ
SVKRQRANQSSSDLITMVMPEGEEASSQSEHLRPHHHGDARE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtctggaaacggaggagtattggaagaagatatggacaatcaaattgtacag
gctgtgtgtgtagatgatgggataggggtgatgtcggggtcgatcgggatgtcagacttc
tccgatgagatcttgttaagtatcctgcgctatgtctcgacctctgacctggtgaataac
gtatccaggacctgccgcaagctgcacacactctgctacgacaagacactgctgaccacg
gtcacactgtctgaagaatacacggcaaatgacggcgctattcgccaggtgctgaagcat
ctatccaatcacgtgcagtccctcagcctgagcggctgctattggctgtcgggttctacc
atcgaccggctgattggctgtcgctccctggtgcgtctggacctttcagggtgtcgcctc
acctccctgcgtctgtcccgcctcctctcctctctctctctcctccagtctcttgctttt
gacgtggcgccgggctttgattccgcccagctgagtggggaggcccgtgattcgctgtcc
cggctgtcagagctgagacagacggtcttgacgcccagttacggcgttgtcccctgctgc
tccaggctcttcagtctacagctgcagctggacatacctgacgtcaccagggaaggttcc
agtgtgtgttgccagctgatgattggccagagcagtgttcctcactaccaacagctggag
gagtttacagcccgcctggcgcctggagaggtgaaccagactctgctcctcctctacctg
gctgtgttcagtgttcgtgttccggagcgtctccgctgcttcctggtttcagttcctggt
ccaaaccccgcccactggcctgctgcgtcctcattggcccatagcctctgtcagcatggc
gacctggaagccctgcagttgcctcgctcctggttggacgccacatcgctaggcgggtcc
ttcttagcaacgctcccaagcacctcaacttctcccgttgcccccacgttacgacaaact
gtcatccaatcgctgactggcgccagacctcgccaaactcacgcactcctccgctcgctg
gcgctgcccgcctgcgccctgtcggacggtcccgccgcaccctccccttccccgccccct
ccctccccgctgctggggctgaggaagccgtcccgcgtggggctccggacctacaggccg
cgctctgaggactctctccccagggagggcgcctcttccgggctgggtaccctgctggct
ggctgcccctctctggaggttctggagttaacaggaccgggcttcgtctccgccctgccg
cgtctcgagccctgtgccagggtgtgcgtggatcagagggtgtgtgtgtgcgcgggcggg
gtcggggacgcgcacgttgccgcgctccgggggttccgggggctgcggaggctgacgctg
gcggggttgccggggatcctgaaggggaacgggctggtgcaggtctctgagcactgccgg
gacctgcaggctttatcactggccaacctggggtccttgaagacctggaactacagcgcc
gccctgctggagacactgaggaactgcacacagctcacagagctacggttggagcagccc
tacctggtgtgtagcggtgcattctgggaggcgttgtcatgctgctctcgtctctgccgt
ctctgtcgcctctcgaacggaaccttccaccccgctgccgtggtgaccttcatggagcgt
tgccgtgacgtcatggtgtgtcacatgttcttgggcggaactctggtggcgtgccgcaca
cgcagaaaacactatcgtttctctgtggagcgtccggccctcagtgtggtcatctaccca
ctgctccatgaagaccttccattggtcatcagagacatgcccctcccactgctcgatcaa
ctgaccctcttccagagccgcgttgcccaggccccgccctcatcacaatggcgacgccag
agtgtgaagaggcaacgagccaatcaaagctcctcagacctcatcaccatggtgatgcca
gagggtgaagaggcatctagccaatcagagcacctaagacctcatcaccatggtgacgcc
agagagtga
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