Coregonus clupeaformis (lake whitefish): 121557694
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Entry
121557694 CDS
T08357
Name
(RefSeq) 26S proteasome regulatory subunit 6A-B isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121557694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121557694
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121557694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
RuvB_N
AAA_16
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
IstB_IS21
AAA_7
AAA_24
CCDC22_CC
AAA_28
ATPase
NPHP3_N
Sigma54_activat
Golgin_A5
AAA_14
RNA_helicase
Parvo_NS1
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
121557694
NCBI-ProteinID:
XP_041727130
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MASLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgaatgacagatcagtttgggatgaggtggaggatgggatcggcgaagaa
gtcctcaaaatgtcgactgaagagatcgttcagcggacacgtcttctggacagtgaaata
aagatcatgaagagtgaggtgttgagggtaacccatgagctgcaggccatgaaggacaaa
atcaaagaaaacacagagaagatcaaagtgaacaagaccctgccatacctggtctccaat
gtcatcgagcttctggatgtggacccaaatgaccaggaggaggatggagcaaacattgat
ctagactcccagaggaagggcaaatgtgctgtcatcaaaacatctacaagacagacatac
ttcctcccagtcattggcttggtggatgcagagaaactgaagccgggagaccttgtgggg
gtaaacaaggactcatacctgatcctggagaccctgcccacagagtacgactccagagtc
aaagccatggaggtggacgagcgccccactgaacagtacagtgacattggtggattagac
aaacagatccaggagctggtggaagcaatcgttctgcccatgaaccacaaggagaagttt
gagaacctgggtattcagccacctaagggggttttgatgtatggccccccaggcacaggg
aaaaccctactggctagggcctgtgctgcccagaccaaggccacattcctcaagctggct
ggcccacagctggtccagatgttcattggtgacggtgccaagctggtccgagacgccttt
gccctggccaaggagaaggccccctctatcatcttcatagatgagctggacgccattgga
accaaacggtttgacagtgagaaagcaggtgacagagaggtccagagaactatgcttgag
ctcctcaaccagctggatgggttccagcccaacatgcaagttaaggttatcgctgccact
aacagggtggatatcctagatcccgcactgctgcgttctggacgtctggaccgtaagatt
gagttcccaatgcccaatgaggaagcacgagcccgcatcatgcagattcactcacgcaag
atgaacgtcagccctgatgtcaactacgaggagctggccaggtgcactgatgacttcaac
ggtgcccagtgcaaagcagtgtgtgtggaggcgggtatgatcgcccttcgcaggggggca
actgagcttaatcatgaggactacatggaaggcatcttggaagtacaggccaagaagaag
gccaacctgcagtactatgcctaa
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