Coregonus clupeaformis (lake whitefish): 121557713
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Entry
121557713 CDS
T08357
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121557713 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121557713 (grin2bb)
04082 Neuroactive ligand signaling
121557713 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121557713 (grin2bb)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121557713 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121557713
NCBI-ProteinID:
XP_045069207
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MYKVLHSHSSTMLVSLLSPSPLQDRRVTSSASFPPPPPEHSSSPHQHPRLALPSLSLPLS
LSLLLLSLLLLPVCESARSPGRGGAGQGGGAPGGAPGTGGAGGQKGGLIPPHYPPYYPPV
SPARPPAPPLPPKVASSLSIAVILVGNSSEVSSTYVEKEEFLHVPHPTKVQLETMNYTDP
KSIINRICTLMTNTWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKD
DHSMFFQFGPSIEQQASIMLKIMEEYDWYIFSIVTTYYPGYQDFVNKIRSTIENSFVGWE
LEEVLLLDMSVDDGDAKIQNQMKKLQSPVYLLYCTKEEAYTIFEVANSVGLTGYGYTWIV
PSLVAGDADNVPAVFPTGLISVSYDEWDYGLEARVRDAVAVIAMATSTMMLDRGQHTLLK
SGCNETPNKKGSKQGNSNEVLKYLMNVTFEGRNLSFSEDGYQMHPKLVITLLDKQRRWDK
VGKWENSSLSMKYHVWPRFELFSDGEAREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNT
VPCRKQLKILNQTVPGQYTKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKINGTW
NGMVGEVEQKKAHMAVGSLTINAERSEVIDFSVPFIETGISVLVSRSNGTVSPSAFLEPF
SADVWVMMFVMLLLVSAIAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVF
NNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDNKFQKP
NAFSPPFRFGTVPNGSTERNIRNNYPEMHQYMTSYHQKNVDEALASLKGGKLDAFIYDAA
VLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEELEA
LWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHAFYWQLRFCFMGYC
TGKPGFTFSISRGIWSCIHGVQIEENKSTMDSPSATMNMNMNNTHSNILRLLRTAKDMTA
IPGVNGSPHTHGALDYGGHHRGGGESPGIYDISEHRRSLQERKAPPPPYLPEDNMFSDYI
SEVERTFGNLPLKDNNLYQDHYLHHHSGPGPRLALGMSGPPPNRQSSLGSTSSLEGGMFD
CDSLGGGVAPIFTTQPRVASLTHRNTNKFDLIAGHASASGSGQQGGQFKSNDLYGRFSFK
GGASSSGFIDRGGHDRYCVGGGGGGGGGSGGDDVSDISSHTITYGNLEGNAKRRKQYRDS
LKKRPASAKSRREQDEIDYRRRAHHHHTVHHHFSRGPLGHRSASPPLAPSERKRGGGGGG
GGNSSPYLFRDKENLREFYAEQFRSKEGSAKWEHVDMSDGPCPMGSGGGGGGGGSSGSGI
CKSLVPVEDFLKGNKPKKSEGTSGVVGGMGLGSSGQQAHTCWEKNMSEVGGGGIAGGDWE
CRNHSGGGGGGGGGKSISHHGGGGGGGKSISHHGGGGGGSTCTHGGTSGGGGNSRPSSAT
CKRCESCKKQGNLYDISEDNLIFSKMGGGGEKSGDAGGAGQSQSQAQRRKLGPGGRVLRR
QHSYDTFVDLQKGGGGRRMGGGGGGGGGGEGGGGGQLPPPRSVSLKDKDRYMEGVSPYAQ
MFAQYAERDRDSPSFFSRGGSERERAKGGSSFSLFRGERGEGGLHRRSVGEKDMRDRDRR
MMGGGGGVGGSGKGAGTYSLSKSLYPDKVTQNPFIPTFGDDQCLLHGGKPYYVKMSPQQQ
QQPPQHLLNNSRGDFRGSMGVPSYLPASATTGVMSNVTPRFPNDLCLGGGLGGPMGNHHG
PGLGGNKLLPVRDRGLGMVGQGGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggtactgcattcacactcctccacgatgcttgtcagcctcctctccccctcc
ccactccaggacaggcgcgtcacctcctccgcctccttccccccccctcctcccgaacac
tcctcttcccctcatcagcacccccggctggcccttccctccctctccctccccctctcc
ctctctctcctcctcctctccctacttctcctgcccgtctgcgagtcggcgcggtcacct
gggaggggcggagctggccagggcgggggagcaccaggaggagcacccgggacgggagga
gcaggaggccagaaaggaggcctcatcccccctcactaccccccttactaccccccagta
tcccctgcccggccccctgcgccccccttacctcccaaagtggcctcgtctctcagcatc
gccgtcatcctggtgggcaactctagcgaggtgtcgtctacctacgtggagaaagaggag
ttcctccatgtgccccaccctaccaaagtccaactggagaccatgaactacacggacccc
aagagtatcatcaaccgtatctgcaccctgatgactaacacctggctgcagggggtggtg
ttcggggacgacacggaccaggaggccatcgcccagatcctggacttcatctctgcccag
acacacatccccatcctgggcatccgaggaggctcctccatggtcatggctgccaaggac
gaccactccatgttcttccagtttggcccgtccatagagcagcaggcgtccatcatgctg
aagatcatggaggaatacgactggtacatcttctccatcgtcaccacctactaccccgga
taccaggactttgtcaacaaaatccggagcaccatagagaacagttttgtgggctgggag
ctagaagaagtcctcctgttagacatgtctgtggatgatggagatgctaagatccagaac
cagatgaagaagctgcagagccctgtctacctgctctactgcaccaaggaggaggcctac
accatcttcgaggtggcaaactctgtgggactgacgggatacggatacacctggatcgta
ccgtcgctggtggccggcgacgccgataatgtccctgccgtgttccccacagggctaatt
tcggtgtcgtatgatgaatgggactacggtttggaggctcgggtgagggatgcagtggct
gtcatcgccatggcgacttccaccatgatgctggaccgggggcaacacacgctgctcaag
tcaggctgcaacgagacccctaacaagaagggctccaaacaaggcaactccaatgaagtg
ctcaagtatctgatgaacgtgacgtttgagggacgcaacctgtcgttcagtgaggatgga
taccagatgcaccccaaactggtcatcaccctgctagacaagcagagacgctgggacaag
gtgggtaagtgggagaacagctccctgtccatgaagtaccacgtgtggcccaggtttgag
ctgttctccgatggggaggcccgggaggacgaccacctgtccatcgtgacgctggaggag
gctccctttgtcatcgtggaggacgtggaccccctcagtggcacctgcatgaggaacacc
gtgccctgcaggaaacagcttaaaatactcaaccagacagtacctggtcagtacaccaag
cgctgctgtaaaggtttctgcatcgacatcctgaagaagatcgccaagcaggtcaagttc
acctacgacctctacctggtcaccaacggaaagcacggcaagaagatcaacggcacctgg
aatggaatggtcggggaggtggagcagaagaaggcccacatggccgtggggtcgctcacc
atcaacgcggagaggtctgaggtcattgacttctccgtgcccttcatcgagacggggatt
agtgtcttggtctcccgtagcaacggcactgtctccccctctgccttccttgagccgttc
agtgcggacgtgtgggtgatgatgtttgtgatgctgctgctggtgtctgcgattgctgtg
tttgtgtttgagtacttcagcccggttggctacaaccgctgcttggcagacggacgagag
cccggcggcccctccttcaccatcggcaaggccatctggctgctgtggggcctggttttc
aacaactctgtccccgtccagaaccccaaaggcaccaccagtaagataatggtgtcggtg
tgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggctgccttcatg
atccaggaggagtatgtggaccaggtgtcgggcctcagcgacaataagttccaaaaaccc
aacgccttctccccgccattccgtttcggaacggtgcccaacggaagcacggaacggaac
atccgcaacaattacccagagatgcaccagtatatgaccagctaccaccagaagaacgtg
gacgaggccctggcaagcctcaagggaggtaaattggatgccttcatctacgatgccgct
gtgttgaactacatggccgggagggacgagggctgtaagcttgtgaccatcggcagcggg
aaggtgttcgccaccaccggttacggcatcgccatccagaaggactctggctggaagaga
gcagtggacctggccatcctcatgctgttcggcgacggagagatggaggagctggaggct
ctgtggctgacggggatctgccacaatgagaagaacgaggtgatgagcagccagctggac
gtggacaacatggcgggcgtcttctacatgctgggggcggccatggctctgtcgctcatc
accttcatcgccgagcacgccttctactggcaactgcgcttctgcttcatgggctactgc
accggcaagccaggctttaccttctccatcagcaggggcatctggagttgtatccacggg
gtccagatcgaggagaacaagtcgaccatggactctccatcggccaccatgaacatgaac
atgaacaacacccactctaacatcctgcgactgctccgcaccgccaaggacatgaccgcc
atcccgggggtcaacggctcgccgcacacgcacggcgccctggactacggtggccaccac
cgcggcggcggtgagtcgcccggcatctacgacatttccgagcaccggcgtagcttgcaa
gagcgcaaggccccgccgccgccatacctgcccgaggacaacatgttcagcgactacatc
agcgaggtggagaggacttttggcaacttgcccctgaaggacaacaacctgtaccaggac
cattacctgcaccaccactcaggcccgggacccaggctggctctgggtatgtccggcccc
ccgcctaacaggcagagtagcttaggtagtaccagttcattggagggagggatgtttgat
tgtgacagcttagggggaggggtagcacccatattcaccacacagccccgcgttgcctcc
ctgacacacaggaacaccaataagtttgacctgatcgccggccacgcctcggcctcaggc
tccggtcagcaggggggtcagttcaagtcgaacgacctctacgggaggttctccttcaaa
ggcggggcgtccagttctgggtttatcgacaggggcggtcacgacaggtactgcgtgggt
ggaggaggagggggtggcgggggctctgggggcgatgatgtgtcggatatctcctcgcac
accatcacctacggcaatctggagggcaacgccaagaggcgtaaacagtacagggacagc
ctgaaaaagaggcccgcctcagccaaatccagacgggagcaggacgagattgattaccgg
aggcgagcccaccaccatcacaccgtccaccaccacttctcccgcgggcccctaggacac
cgctcagcctccccgcccctggccccctctgagcggaagagaggaggaggtggaggagga
gggggtaactcttcaccttacttattccgcgacaaagaaaatctaagggagttctatgcg
gagcagttccgttccaaggagggctcagccaagtgggagcatgtggatatgtccgacggg
ccttgtccgatgggcagtgggggaggaggaggcggtggcggtagtagtggtagtggcatt
tgtaagagcctagtgcccgtggaggatttcctgaaaggtaacaaacccaagaagtcagag
ggtacaagtggcgtagtcggagggatgggcttggggtcgtcagggcaacaggcccacacg
tgttgggagaagaacatgtctgaagtggggggtggaggcatagcagggggtgactgggag
tgtcggaatcacagtggtggtggcgggggaggaggagggggcaagtccatctctcaccat
gggggagggggaggagggggaaagtccatctctcaccatgggggagggggaggagggagc
acctgtacgcatgggggcactagtggcggagggggaaatagtcgcccaagctctgctact
tgcaaacggtgcgagtcgtgtaagaaacaaggcaacctgtatgacatcagtgaggataac
ctcatatttagcaagatggggggtggaggggagaagagtggtgacgcggggggtgctggc
caatcacaaagtcaggcacagcgcaggaagctagggccaggtgggcgggtgttacggagg
caacactcctacgacacgtttgtggatttgcagaagggggggggcggccgccgcatgggc
gggggtggaggaggaggtgggggaggagaaggagggggaggggggcagctccccccgccc
agaagcgtgagcttgaaagacaaagaccgctacatggagggtgttagcccatacgcccaa
atgtttgcccagtacgcggagagggacagagatagtccctcctttttcagtcggggtggt
agtgagcgggagagggcgaaaggaggctcctccttcagtttgttccgaggcgaacgaggc
gaaggtgggttgcaccgtcggtcggtgggggagaaagacatgagggacagggatagaaga
atgatgggaggtggaggtggggtgggcggtagtggcaaaggggccgggacttactccttg
tctaaatctctctacccagataaggtgacccagaaccccttcatcccaaccttcggcgac
gaccagtgtctattacacggcggcaaaccatactacgtcaaaatgtcgccacagcaacag
caacaaccgccacagcatctcctcaacaacagccgcggggacttcagaggctccatgggg
gtgccttcctatttaccggcatcagccacgacgggggtcatgtccaacgtgacccccagg
ttccccaatgatctgtgtcttggtggagggttgggggggcccatggggaaccaccatggc
cccggactgggaggcaacaagctactgccggtcagggacagggggttagggatggtgggg
cagggcggccagagacccttcaatggctcgagcaacggccacgtttacgagaagctctcc
agtatcgagtctgatgtctga
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integrated database retrieval system
