Coregonus clupeaformis (lake whitefish): 121557719
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Entry
121557719 CDS
T08357
Name
(RefSeq) myomesin-3
KO
K24495
myomesin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121557719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121557719
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121557719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
Tissue_fac
C2-set_2
CRLF2-like_D2
Adeno_E3_CR1
Ig_J_second
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
121557719
NCBI-ProteinID:
XP_041727139
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MATKTLTTRVQEQQSHQMSHSMALASQIKKKTFTSSDEEASYSEFYPIIPGDVMSVKEIL
NIGKFPRHRTWDVLKETMAADEQGLRTGEKWTLFGNEAEKVEVEVLREQHYIRQRCDRMA
LRRQAEQKASIHLKYLEDLSQKAPDFPIPLRAHMVWESMGVKLSCTVQGCPPPRVTWYKD
GVPLSAYGQAWNYSLKQKFGLNSLEIRRCSVEDAGVYKVVAKSSLGEATTIATLVVNSYQ
GAEAAIEKSWTPIAMLEREALFEFSFPPTWVKEGDNLTVQCAFSSALLPFQQDVAWFKDG
VKLCQSSRVELQTALRSSSLTLKGVHKEQEGMYMVRLRTWEGVKEHKAYIFVRDASAVVS
GGPGSPLALKVSDVQKDYVFLTWEPPSADGAYQVEGYFVERCDIGSGQWVRCNDTIQKAC
HYPVRGLSDSTIYQFRVCAVNQAGVGRPSKATEPVITTDPLEHTRTMVIKVDRGREITIT
KDQLESQMKVPFPPTGVHACEVSDSYAVLSWTEPEPRGKEQLTFYVERSIAGKNSWQLAS
MDITVGSPRFPMFNLQKGKSYCFRVRSVNKFGVSEPSEPSPPISLGQPQAAPAPATSVLA
IRDTDSAVLLQWQEPKEKEGILGYYLYYSEAGKQEWRTVNNKPTTNTKFTVHGLKSKKEY
VFRVKSVGRAGNSIYSNESPPILVKAALIAPSPSSAIALLLCTGSEMILTWRAPANNGGD
PVRGYYLDQKDKELDSWRKVNTKPAKERQHKVCNLDGGHYYQFRVFAANVVGVGKPSEPS
EAFLCEEWTMPEPGCPYDLEFREVRHNSLVLLWAVPLYEGQQGPITGYLVELSRGDQSQS
WTAVNEEPITDTFFKVSGLQAGQTYRLRVCAFNKAGVGIPSLPSELIRAQTQPGTRDIEI
GVDNDGFIFLAFEATEITENSKFVWSKNYKGAIEAGRARVLWDNNRSILTFTNATKEDLG
LYTVEMSDNPDISSSFTFTAEDLERLTELGWHICHPLIALRSKWQVEVSEKGNVRLWMQT
ESLSNAAELHLILNDREISSTAAHKINFDKASGLIEILFDQLSKEDEGSYTAQLCDGRAK
NQFTLVFVDEMFRQTLAQSIANRMDYKRKSGPYFLEFVSWTVTEDCEFIIKCKVTNINKD
TTLKWFKDGVETPGVYDQQTGVSTMTVQQVTKKEAGHYEAVVSDGRGQDVSTLELLNEEY
DKLLQLLSKQCALSAGPVRIQCTAVGFKLYCSLKYYISYMKTSWHFKESRIDQLERCKPG
SSMQKLWVEVFAPTENDKGKYTLEMFDGQEKHTRSLDLSGQVFADALLEYQRLKQVAVAE
KNRARVTKGLPDVVAIMENKSLCLTCFADGDPAPEMFWLRNDKGIVSGGQFNIANENKSS
TLTVNNVTSEDSGNYSIFVRNQYGTQTVNVTVSVYKHGEKPPPDAVEM
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaagacactgacgacacgggtccaggagcagcagtcccaccagatgtcccac
agtatggcgctggcctcgcagatcaagaagaaaaccttcacctccagtgatgaggaggct
tcctactctgagttctatcccatcatccccggtgatgtgatgtcggtcaaggagatcctg
aacatcggcaaattcccacgccacaggacatgggatgtcctgaaggagaccatggcagcg
gatgagcagggtctgagaactggagagaagtggaccctgtttggaaatgaggctgagaag
gtggaggtggaggtgctcagggaacagcattatatccgccaacgctgtgaccgcatggcc
ttgcgtaggcaggctgagcagaaggcttccatccatttgaagtatctggaggacctgagt
cagaaagccccagacttccctatcccgctgagagcccacatggtgtgggagagcatgggg
gtcaaactctcctgcaccgtccagggatgcccacccccacgggtcacctggtacaaggac
ggggtacctctgagtgcctatggccaggcctggaactacagtctgaagcagaagtttggc
ctcaactcgctggaaatcagaaggtgctctgttgaggatgctggggtgtacaaggtggtt
gccaagagttctctgggtgaagctactaccattgccactctggtggtcaactcatatcaa
ggagccgaggccgcaatcgaaaaatcctggaccccaattgcaatgctggagcgggaggct
ctgtttgagttcagcttccctccgacctgggtgaaagaaggggacaacctgaccgtgcag
tgtgccttctcctcggccctgctgcccttccaacaggacgtggcctggttcaaagatgga
gtcaaactgtgccagtccagcagggtggagcttcagactgcccttcgctcctcctccctc
accctgaagggcgtgcacaaggagcaggagggcatgtacatggttcgtctgcgtacctgg
gagggggtcaaagagcataaagcttacatttttgtcagagatgcgtctgcagtagtgtct
ggtggtccaggctctcctctggccctgaaggtttctgatgtacaaaaggactatgtcttc
ctcacctgggagccccccagtgctgatggagcctaccaagtggagggttactttgtggag
aggtgtgacattggtagtgggcagtgggtgcgttgtaatgacaccattcagaaggcatgt
cactacccggtgaggggtctgagtgacagcaccatctaccagttcagggtgtgtgccgtc
aaccaggcaggtgtaggacgcccctctaaggctaccgagcctgtcatcaccaccgaccct
ttagaacacaccagaactatggttatcaaggtggacagaggtagagagatcaccatcacc
aaagaccagctggaaagtcagatgaaagtcccgttccctcccactggtgtccatgcctgt
gaggtgagtgacagctacgccgtgctgagctggaccgagccggagcccagaggcaaagag
caacttaccttctatgtggagcggtccattgcagggaaaaacagttggcagctggccagc
atggacatcacggtgggctctcccaggttccccatgtttaacctacagaaggggaagtcc
tactgcttccgggtgcgctccgtcaacaagtttggcgtgagcgaaccctcagagccgagc
cctccaatctcactgggacaaccacaagctgctcctgctccagccacctccgtcttggcc
atccgagacacagattctgctgtcctgcttcagtggcaggagcccaaggagaaggagggc
attctgggatactacctgtactacagcgaggctgggaagcaagagtggaggacagtcaac
aacaaaccaaccaccaacaccaaatttacagtccatggtctgaagtcgaagaaggagtat
gtgttcagagtgaagtctgtggggcgagctgggaacagtatctactccaacgaatctccc
cctatcctggtcaaagcagctctcatcgccccatccccttcctctgccatcgccctgctg
ctctgcactggctctgagatgattctcacctggagagcccctgctaacaatggaggagac
cctgtacgaggctactacctggaccagaaggacaaagagctggattcctggagaaaggtc
aacaccaagcctgccaaggagaggcagcacaaggtctgtaacctggatggggggcattac
tatcagttccgtgtttttgctgccaacgtggttggggttggtaaaccctctgagcccagt
gaggctttcctgtgtgaggagtggaccatgcctgagccaggctgcccttatgacctggaa
ttcagggaggtgaggcataactctctggtcctcctgtgggcggtgcctctctacgaagga
cagcagggaccaatcacagggtacctggtggagctgagcaggggcgaccaatcacagagc
tggactgctgtgaatgaagagccaatcacagacacctttttcaaggtatcaggtctccag
gcaggtcagacctatcgtctcagagtgtgtgccttcaacaaggctggagtgggcatccct
tctctgccctctgagcttatcagagcccagacccaaccaggcaccagagacatagagatc
ggtgtggacaatgatggcttcatcttcctggcctttgaggccactgaaattacggagaac
agcaagtttgtctggagcaagaactacaaaggggctattgaagctgggagagccagggta
ctgtgggataacaataggtccatcctaacctttacaaacgccactaaagaggacctgggc
ctgtacacagtagagatgagtgacaacccagacatctcttccagtttcacctttactgcg
gaagatctagagagactgaccgagctcggctggcacatctgccacccattgatagccctg
cgctccaagtggcaggtggaggtgtcagagaaagggaacgtgcgtctctggatgcagact
gagagcctgagcaacgctgcagagctccacctcattctcaatgacagagagatctcgagt
actgcagcccataagattaactttgacaaggccagtgggctgatagagatcctgtttgac
cagctgtctaaggaggacgagggttcctacacagctcagctctgcgacggccgcgccaag
aaccagttcaccctggtgttcgtggacgagatgttccgtcagacactggctcagtccata
gccaacagaatggactacaagagaaagtcaggaccctattttctggaatttgtgtcatgg
accgtgacagaggactgtgagtttatcatcaaatgcaaggtgaccaacataaacaaggat
acgactctgaagtggttcaaggacggtgtggagactccaggagtgtatgaccagcagact
ggagtcagcaccatgactgtgcaacaggtgactaagaaggaggcaggccactacgaagct
gtggtgtctgatggtagaggacaggatgtgagcacactggagttactaaatgaagagtat
gacaagctcctccaactcctgagcaaacagtgtgcgctgtctgcaggaccagtgaggatc
caatgcactgctgtgggcttcaagctctactgctctctcaaatactatatcagctacatg
aagaccagctggcacttcaaggagagtaggattgaccagttggagaggtgtaagcctggc
agcagtatgcagaagttgtgggtcgaggtctttgcgcccacagagaacgataaggggaag
tacaccctggagatgttcgatggtcaagaaaagcacacacgctcactagacctatctgga
caagtctttgctgatgctctgttggaataccagaggttgaagcaagtggcggttgctgag
aaaaatcgggccagggtgaccaagggcctaccagatgtggtggctatcatggagaataag
tctctgtgcctgacctgctttgctgacggtgaccccgccccagagatgttctggctgagg
aacgacaaaggcatcgtctcggggggccagttcaacatcgccaatgagaataagtccagc
actttgaccgtcaacaatgtgactagcgaggactcgggcaactacagcatctttgtgcgc
aaccagtacggcactcagacggtcaacgtgaccgtgagcgtgtacaagcacggcgagaag
cccccgcccgatgcagtggagatgtaa
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integrated database retrieval system