Coregonus clupeaformis (lake whitefish): 121557848
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Entry
121557848 CDS
T08357
Name
(RefSeq) tubby protein homolog
KO
K19600
tubby and related proteins
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121557848
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121557848
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121557848
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Tubby family proteins
121557848
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
121557848
NCBI-ProteinID:
XP_041727250
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Position
28:29981021..30022527
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AA seq
619 aa
AA seq
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MSYYSIRPSSSASFSSTSTASALDDDSTSLRQQKLEKQRALLEQKQRRKRQEPLMVQPNP
EARPRRSRPRRSEEQAPLVESRLSITSDVIMDVQSEGSTSGEDSEREWWEKLGPGPMLPR
KAGRGPVMELTLEEQSGLPDRVKVVEETPRKLFSLMPRWAFRWGGESHIQRGRAAFRLPG
IDGPAAFMGSEAPDLGTKIQILSVSQSQPLSLSQPLPQSPPAEEPDRDGDTETLLEPKTD
IHELLQKREAWDISLSPSPSLTDPTRGRVVQLVGAVEEGPEEGPEEGPERPLSAREKLLQ
SGLSGSMNYEEASEEDGDKDRTRSLSPNTESTRPASASSTKSNTEYVTPGSPTAESALIE
VDNLEQFVVRPAPRGVTVKCRISRDKKGMDRGLYPTYFMHLEREDGRKLFLLAGRKRKKS
KTSNYLISVDPTDLSREGESFMGKLRSNLMGTKFTVYDHGTNPCKNPGALLEESNTRQEL
AAICYETNVLGFKGPRKMTVIIPGMNMNFERVPVHPNSEQDSLLSKWQNHSLENLIELHN
KAPVWNDDTQSYVLNFHGRVTQASVKNFQIVHDNDPDYIVMQFGRVAEDVFTLDYNYPMC
ALQAFAIGLSSFDSKLACE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagttactacagcataagaccctccagctccgccagcttctcctctacctcaacagca
agtgcccttgatgatgacagcaccagcctcaggcagcagaagctggaaaagcagagggcg
ctgttggagcagaagcagcggcggaagcggcaggagcctctgatggtgcagcccaaccca
gaggcccggcccaggcgctccaggccccggcgcagtgaggagcaggccccgctagtggag
tcacgcctcagcatcaccagcgatgtcatcatggacgtccagagtgagggcagtacgtca
ggtgaggatagtgagagggagtggtgggagaagctggggccaggccccatgttgcccagg
aaagcagggagagggccagtcatggagctcactctggaggagcagagtggccttccagat
cgagtcaaggtagtggaggagacacccaggaagctgttctctctgatgcccagatgggcc
ttcagatggggaggagagagtcacattcagagaggcagagcagcattcagactcccaggt
atcgacggccctgctgccttcatgggctctgaggccccagacctgggtaccaagatccag
attctgtctgtgagccagtcccagcccctgtccctgtcccagccgctgccccagtctccc
cccgccgaggagccagaccgggacggggacacagagactctgctggagcccaagacggat
atccacgagctgctgcagaaacgagaggcgtgggacatctcactcagcccctccccctct
ctgactgaccccacccgcggcagggtggtccagttggtaggtgcagtggaggagggcccg
gaggaggggccagaggaggggccagagcgcccactgtctgccagggagaaactactccag
tcaggtctgtcaggcagtatgaactacgaagaggccagtgaggaagatggtgataaagac
cggacccgctcgctgtcccccaacacagagtcaacccggcctgcgtctgcctccagcacc
aagtccaacacagagtacgtgacaccggggtcgcccacggcggagagcgccctgatcgaa
gtggacaacctggagcagtttgtggtgcgtcccgccccccgcggcgtcaccgtcaagtgc
cgcatatcccgggacaagaagggaatggaccgcggcctgtaccccacctactttatgcac
ctggagagagaggacggcaggaagctgtttctgctggctgggaggaagaggaaaaagagc
aagacgtccaactacctgatctcagtggaccccacggacctgtcacgcgagggagagagc
ttcatggggaaactgaggtccaacctgatggggaccaagttcacggtgtatgaccacggc
accaacccctgtaagaaccctggagctctgctggaggagagcaacacacgacaggaactc
gcagccatctgctatgagaccaacgttctggggttcaaaggtccccgcaagatgaccgtc
atcatcccaggcatgaacatgaactttgagagggtccctgtccacccaaacagcgagcag
gacagccttctaagtaagtggcagaaccactcactggaaaacctgatcgagctgcacaac
aaggcccccgtgtggaatgacgacacccagtcctacgtgctcaatttccacggccgcgtg
acacaggcctccgtcaagaactttcagatcgtccacgacaacgacccggactacatcgtg
atgcagtttggcagagtggccgaggacgtattcaccttagactacaactaccccatgtgt
gccctgcaagccttcgctattggcctgtccagtttcgacagcaaactggcctgcgagtga
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