Coregonus clupeaformis (lake whitefish): 121557935
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Entry
121557935 CDS
T08357
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121557935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121557935
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121557935
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121557935
NCBI-ProteinID:
XP_041727320
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Position
5:complement(48709..308980)
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AA seq
455 aa
AA seq
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MEGDGSQATSGGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFTKFGEIRECMVMRDPTTK
RSRGFGFVTYIDAASVDNVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSA
NTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEVEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSY
QFPGFPTAAYGPVAAAAVAAVRGSGRGARGRGGYMAYQQNAGAGFPDYGFYSGAGPSDLR
GPPCSFADYGSLGPQAAQMLQHSEHHATSACNSPLQHHLQHSPDPFKSPGTNQARPGAFP
GTNSPGPVADLYGTPSQDSGVGNYISAASPQPGSGFGHSIAVSMAYSSNSSTSSNTAFIF
SVLSTIVLVHSLSPFQLIVRIFHQSEGYGFYTQKR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacatctggaggaagccctaatgattcgcaacacgac
ccgggtaaaatgtttatcggtggcctcagctggcaaacttcaccagacagccttagagac
tattttactaaattcggggaaatcagagaatgtatggtgatgagagatccaacaacaaaa
cgctccaggggcttcggattcgttacttacatagatgctgccagtgtagataacgtctta
gctcagccacatcacgaattagactcaaaaacgatcgatcctaaagttgccttccctaga
cgtgctcaacccaagatggtcacaagaacaaagaaaatattcgtaggaggattatcagcg
aacacagtagttgaagatgtgaagcagtattttgaacagtttggcaaggtagaggacgcc
atgcttatgtttgacaaaacgactaacagacacagaggtttcggctttgtaactttcgag
gttgaggacgttgtggagaaagtatgcgagatccactttcatgaaatcaataataaaatg
gtagaatgcaagaaggcccagcccaaggaggtgatgttcccgccgggtacgcgaggcagg
gccaggggcctgccctacaccatggacgccttcatgctggggatgggcatgctgagttac
ccaaacattgtagcaacgtacggccgtggatacactggttttgccccgagctacagctac
caattccctggcttcccaacggcggcatatggaccggtggcagcggcggcagtggcggca
gtgcgtggctcaggtaggggggcccgtggaagaggtggctacatggcataccagcagaac
gcaggggcagggttcccagattatgggttctattccggggccgggcccagtgacctgcgg
ggacccccctgctcctttgccgactatggctccttggggcctcaggctgctcagatgcta
cagcacagtgagcatcatgccacctccgcctgcaactcccccctccagcaccatctgcag
cacagcccggacccctttaagagcccaggcaccaaccaggcccggcccggagccttcccc
ggcaccaacagtcccgggcccgtggctgacctctatggcactcccagccaggactccggt
gtgggcaactacattagtgctgctagcccacagcctggctctggcttcggccacagcatt
gctgtaagtatggcctactccagcaactcgtccacctcctccaataccgccttcatcttc
tctgtgctgtcgaccatcgtccttgttcattctctcagcccatttcaactcatcgtcagg
atatttcatcagtctgaaggatatggtttctatacacaaaagagatag
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