Coregonus clupeaformis (lake whitefish): 121557981
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Entry
121557981 CDS
T08357
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121557981
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121557981
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121557981
Protein phosphatases and associated proteins [BR:
cclu01009
]
HAD phosphatases
Fcp/Scp phosphatases
121557981
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121557981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
121557981
NCBI-ProteinID:
XP_041727360
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All DBs
Position
9:327047..337282
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AA seq
258 aa
AA seq
DB search
MDPQSSIITQVSRDEESIREKGPPPSSSKKPRSRGLFHSLFCCLCHDEAEPPPVNNNAPL
LVEENGTVSKVQVRPLLPQAKSKDAGKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGT
VHQVYVLKRPHVDEFLKRMGELFECILFTASLAKYADPVSDLLDKWGAFRGRLFRESCVF
HRGNYVKDLSRLGRDLNKVIIIDNSPASYVFHPDNAVPVASWFDDMADTELLDLIPFFEG
LSKVEDVYTVLRQQKDSS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagtcctcaataatcacgcaagttagtcgcgatgaagagtcgattagagag
aagggtcccccaccctcgtcgtctaagaagcccaggagtcgaggcctgttccacagcctc
ttctgctgcctgtgtcatgatgaggctgagcccccgccggtcaacaacaacgccccgctg
ctggtggaggagaatgggactgtctccaaggtccaagtcagaccgctgctgcctcaggcc
aagtcaaaagacgcagggaagatctgtgttgtcatagacctggatgaaacactggtccac
agctcattcaagccggtgaacaacgcagattttatcattccggtagagattgatggaact
gttcatcaggtatatgtgttgaagcgacctcacgtggatgagttccttaagaggatggga
gagctgtttgaatgtattctgttcacggctagcctggctaagtatgctgacccagtgtca
gacctgctggataagtggggtgcgttccgcggccgtctgttccgtgagtcgtgtgtgttc
caccgggggaactacgtaaaggacctgagtcgtctgggcagggacctgaacaaggtcatc
atcatagacaactccccagcctcctacgtcttccacccagacaacgctgtgcctgtggcg
tcgtggttcgatgacatggccgacacagagctgctggatctaatccccttctttgagggg
ctcagtaaagtggaggacgtctacacagtgctcaggcaacagaaggactccagctag
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