Coregonus clupeaformis (lake whitefish): 121558072
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Entry
121558072 CDS
T08357
Name
(RefSeq) potassium channel subfamily T member 1-like isoform X1
KO
K04946
potassium channel subfamily T member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121558072
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121558072
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GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Lig_chan
Ion_trans
Motif
Other DBs
NCBI-GeneID:
121558072
NCBI-ProteinID:
XP_041727486
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Position
18:39722627..39881969
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AA seq
1284 aa
AA seq
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MMGPRTPIEPDATMSPLHRSSRSHGDRSDSTETLQKNKSSNTGVILDISALKLEEVDSEV
PPLPPRYRFRDLLLGDQSFQNDDRVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFS
LKLLTCALYVLRVALDDPEQVTGVCVNCQNRTNTAAESTESTEINWELIFWVNRRVPVWA
IQVIVALISFLEAMLLTYLSYKGNIWEQMFQISFILEMINTVPFIITIFWRPLRNIFIPV
FLNCWLAKCALENMINDLHRAIQRNHSAMFNQVLILICTLLCLVFTGACGIQHLERASNQ
NLTLFNSLYFCIVTFSTVGYGDVTPHIWPSQLLVVILICVALVVLPLQFEELAYLWMERQ
KSGGNYSRHRAQTEKHAVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVR
RILQIPLWSQRVIYLQGSALKDTDLMRAKMDDAEACFILSSRNEVDRTAADHQTILRAWA
VKDFAPNCPLYVQILKPENKFHVKFADHVVCEEEFKFAMLALNCVCPATSTLVTLLVHTS
RGQEGQLSPEQWQRTYGRCSGNEVYHIRLCDSKFFGEYDGKSFTYASFHAHKKYGVCLIG
VKREDNKSILLNPGPRHIMAAPDTCYYINITKEENSAFIFKQEEKDNKGLPVAGLYDAPS
RLPVHSIIASMGTVAIDLQNPADPPEDSNKLTLPTENGSGSRRPSIAPVLEIADSSSILP
CDLLSDQSEDETNQSDEEGSSVSDFVKGYPPNSPYIGSSPTLCHLLPQKASFCCLRLDKG
CRHNSFEDAKAYGFKNKLIIVSAEMAGNGLYNFIVPLRAYYRPRKELSPIVLLLDYPPDN
HFLEAICCFPMVYFMAGTIDNLDNLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVN
VQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKIERDKGSNLAFMFRLPF
AAGRVFSISMLDTLLYQSFVKDYMIPIARLLLGLDTTPGSGYLCAMKVTEEDLWIRTYGR
LFQKLCSSSAEIPIGIYRTESHMFSSSESQVSINVEDTGGDDQRDNRCKSWKEKTGTHRM
STTSESEHPLLRKKSLQWARRLSRKNTKPQSRAERISQQRLNLYRRSERQELSELVKNRM
KHLGLPTVGYEDVANLTASDVMNRVNLGYLQELQGMSEHPLGEETRTGANTGGFGEAEAL
YPPTPKLESHSVPDEMNDHQNTLSYVLINPPPDTMLELNDIVYIIRSDPLAGPNVPEDPA
QGQSSGGGRMRQDFGTETRDETHL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaccgcggacaccgatagagccagacgcaaccatgagcccgcttcatcgatcc
tcgcgttcccatggtgacaggtctgactccacggagaccctccagaagaacaagagcagc
aacactggagttattctggacatctcagcccttaagttggaggaggtggactctgaggtc
cctcctctaccgccccgctaccgcttcagggacctgctgctgggggaccagtcctttcag
aacgacgacagggtgcaggtggagttttatgtgaatgaaaacaccttcaaggagaggctc
aagctgttcttcatcaaaaaccaaaggtcaagcctgaggatccgtctgtttaacttctcc
ttgaagctgttgacgtgtgccctatacgtcctcagagtggctctggacgaccccgaacag
gtcactggtgtatgtgtgaactgtcagaaccgaacaaacacagcagcagaatctacagaa
agcacagaaatcaactgggagttgattttctgggtgaacagaagggttcctgtatgggca
atacaggtgatcgtggccttaatcagcttcctggaggcgatgctccttacatatctcagc
tacaaagggaatatctgggagcagatgttccagatctctttcattctggagatgatcaat
accgtgccatttataatcactatcttctggcgtccattgagaaacatcttcatcccagtg
tttctcaactgctggttagccaagtgtgccctggagaatatgattaacgatcttcatcgt
gccatccagaggaaccactctgccatgttcaaccaggtcctcatcctcatctgcacccta
ctctgtctggtcttcactggggcgtgtggtatccagcatctagagagggcatctaatcag
aacctgactcttttcaactctctgtatttctgcatcgtcaccttctctaccgtgggctat
ggtgacgtcacacctcatatctggccttctcagctgctggtagtcattctcatctgtgtg
gctctcgtggtgctcccgctacagtttgaggagctggcctatctgtggatggagcgtcag
aagtcaggagggaactacagcagacaccgggcccagacagagaaacacgcggtcctgtgt
gtcagctctctgaagatagacctgctcatggacttcctcaatgagttctacgctcaccct
agattacaggactactatgtggtgatcctgtgccctacggagatggacatccaggtgcgt
cgtatcctccagatccccctgtggtcccagagggtcatctatctccagggctcagcgctc
aaagacacagacctcatgagggccaagatggatgatgcagaagcctgttttatcctgagc
agtaggaatgaggtggaccgcactgcggctgaccaccagaccatcctcagagcctgggct
gtaaaggactttgccccaaactgccccctgtatgtccagatcctcaaaccagagaacaaa
ttccatgtgaagtttgctgatcacgtagtctgtgaggaggaattcaagttcgccatgctg
gctctgaactgtgtgtgtccagccacatccaccctggtcacactcctagtgcacacctcc
agaggacaggagggccagctgtctccagaacagtggcagaggacatatggacgttgctcg
gggaacgaagtctaccacatccgcctctgtgacagcaagttctttggggagtatgatggg
aagagtttcacatatgcctccttccatgcacacaagaagtatggtgtgtgtctgatcggg
gtgaagagggaggacaacaagagcatcctgctgaaccctggtcctcgccacatcatggcc
gccccagacacctgctactacatcaacatcaccaaggaggagaacagcgccttcatcttt
aaacaggaggagaaggacaacaagggcctgccggtggccgggctgtacgatgccccctcc
aggctgcctgtacacagcatcatcgccagcatggggacggtagccatcgacctccagaac
ccggcggaccccccagaggacagcaacaagctgactctgcccacagagaatgggtctgga
agcagacggcccagcattgcccccgtcctggagatagctgactcctcctccatcctgccc
tgcgacctgctcagcgaccaatcagaggacgagaccaatcaatcagacgaggagggctcg
tcggtgtcagattttgtgaaaggatatcctcccaactcgccctacattggcagctctcca
accctgtgccatctcctaccacagaaagcctccttctgttgccttcgcctggacaagggt
tgcaggcacaacagttttgaggatgccaaggcctatggttttaagaacaagctgatcata
gtatctgcagagatggcagggaacggcctctataacttcatcgtccctcttcgggcctac
taccgccccaggaaagagctcagccctatcgtactgctattagactacccgcctgacaac
cacttccttgaagccatctgctgtttcccaatggtctacttcatggctggaactatagat
aacctggacaatcttctgcagtgtggcatcatctatgctgataacctggtggtggtggac
aaggagagcaccatgagtgctgaggaagactatatggcagacgccaagaccatagtcaac
gtacagaccatgttcaggctgttccccagtcttagtatcatcactgagctgacccacccc
tccaacatgagatttatgcagttcagagctaaggactgctactctctggctctctccaaa
ctagagaagatagagcgtgataagggttccaacctggccttcatgttccgcctgccgttc
gctgcaggcagagtgttcagtattagtatgctggatacgctgctctaccagtcatttgtg
aaggactatatgattcccatagcaagacttctactaggcctggacacaacgcctgggtcg
ggttacctgtgtgcaatgaaggtgacagaggaggacctgtggatcaggacgtatggcagg
ttgttccagaagctgtgttcctccagcgctgagattcccataggcatctaccgtacagag
tctcacatgttctcctcctctgagtctcaagtctccatcaatgtagaggacacgggcggt
gacgatcagagggacaacagatgcaagtcatggaaggagaagaccggaacccaccggatg
tccaccaccagcgaatcagaacacccgttactgaggaagaagagcctccagtgggcgcgt
cgtctcagccgtaaaaacaccaaacctcagagccgcgccgagcggatctcacagcagcgc
ctcaacctgtaccggcgctcagagagacaggagctgtctgagctggttaagaaccgcatg
aagcacctgggactgcccactgtcggatacgaggatgttgctaatcttaccgccagtgat
gtcatgaaccgagtaaacctaggatatttacaagagttgcagggcatgtcagaacatccg
ttaggagaggagaccagaacaggggcaaacacaggtgggtttggagaagcagaagcactt
taccccccaacccccaagcttgagtcccattctgtcccagatgagatgaacgaccaccag
aacactctgtcctacgttctcatcaacccccctccagacaccatgctggagctcaatgac
attgtgtacatcatccggtccgacccgctggcgggccctaacgtgccagaggatccggct
caagggcagagcagcggcggtggccggatgaggcaggactttggcactgagaccagggac
gagacccacctctga
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